Study : Lmo2547 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C4_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C4_S1
Complex: HSE_B_7(4XB2) / Model_27(4XB2/B) = [3.1] Download728.7610.14VEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYNISVKKVLVRDLEKNRRYETKGFELTTNPSDVLDDPEIAVVVEVMGSITTAREYILQALKAGKHVVTANKDLIALHGDELVAVAQANNCDLFYEASVAGGIPILRTIVNSLAADKIQKVMGIVNGTTNFMLTKMTTEKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMNVNLDNVETNGIRGISPEDIEVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLAGVNYENNAVFVTGAAVGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSYKHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATVVIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG
Complex: GOL_B_15(2EJW) / Model_25(2EJW/B) = [3.1] Download588.655.56VEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYNISVKKVLVRDLEKNRRYETKGFELTTNPSDVLDDPEIAVVVEVMGSITTAREYILQALKAGKHVVTANKDLIALHGDELVAVAQANNCDLFYEASVAGGIPILRTIVNSLAADKIQKVMGIVNGTTNFMLTKMTTEKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMNVNLDNVETNGIRGISPEDIEVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLAGVNYENNAVFVTGAAVGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSYKHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATVVIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG
Complex: DMS_B_26(4PG4) / Model_22(4PG4/B) = [3.3] Download359.5226.82VEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYNISVKKVLVRDLEKNRRYETKGFELTTNPSDVLDDPEIAVVVEVMGSITTAREYILQALKAGKHVVTANKDLIALHGDELVAVAQANNCDLFYEASVAGGIPILRTIVNSLAADKIQKVMGIVNGTTNFMLTKMTTEKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMNVNLDNVETNGIRGISPEDIEVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLAGVNYENNAVFVTGAAVGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSYKHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATVVIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG
Complex: HSE_A_4(4XB2) / Model_7(4XB2/A) = [3.3] Download618.2715.32VEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYNISVKKVLVRDLEKNRRYETKGFELTTNPSDVLDDPEIAVVVEVMGSITTAREYILQALKAGKHVVTANKDLIALHGDELVAVAQANNCDLFYEASVAGGIPILRTIVNSLAADKIQKVMGIVNGTTNFMLTKMTTEKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMNVNLDNVETNGIRGISPEDIEVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLAGVNYENNAVFVTGAAVGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSYKHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATVVIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG
Complex: MPD_B_9(4XB1) / Model_26(4XB1/B) = [3.8] Download653.6413.71VEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYNISVKKVLVRDLEKNRRYETKGFELTTNPSDVLDDPEIAVVVEVMGSITTAREYILQALKAGKHVVTANKDLIALHGDELVAVAQANNCDLFYEASVAGGIPILRTIVNSLAADKIQKVMGIVNGTTNFMLTKMTTEKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMNVNLDNVETNGIRGISPEDIEVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLAGVNYENNAVFVTGAAVGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSYKHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATVVIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG
Consensus
[pKd Mean = 3.32]
-589
(s=124)
14
(s=7)
VEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYNISVKKVLVRDLEKNRRYETKGFELTTNPSDVLDDPEIAVVVEVMGSITTAREYILQALKAGKHVVTANKDLIALHGDELVAVAQANNCDLFYEASVAGGIPILRTIVNSLAADKIQKVMGIVNGTTNFMLTKMTTEKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMNVNLDNVETNGIRGISPEDIEVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLAGVNYENNAVFVTGAAVGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSYKHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATVVIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG