Study : Lmo2551 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C4_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C4_S1
Complex: NACID_K_5(1XPO) / Model_32(1XPO/E) = [3.6] Download--MAKLSIAYLESLTIKDIYSLAKEHKIAYYSKLTKRELIFALLKSNAEKEGFFFMEGVLEIIPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDRVSGKVRPPKENERYFGLLHVEAVNGENPEVAKERVHFPGLTPLYPDRQIHLETEKYPISTRTIDLIAPIGFGQRGLIVAPPKAGKTVLLKEIANAITTNHPDTELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHIKVAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFPAIDMRRSGTRKEELLLSKERLEQLWKIRKAMPKQGDGLDISERFVRYLKKTDNNEAFYELLQEEMFKK
Complex: NACID_M_2(1XPU) / Model_25(1XPU/B) = [4.0] Download--MAKLSIAYLESLTIKDIYSLAKEHKIAYYSKLTKRELIFALLKSNAEKEGFFFMEGVLEIIPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDRVSGKVRPPKENERYFGLLHVEAVNGENPEVAKERVHFPGLTPLYPDRQIHLETEKYPISTRTIDLIAPIGFGQRGLIVAPPKAGKTVLLKEIANAITTNHPDTELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHIKVAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFPAIDMRRSGTRKEELLLSKERLEQLWKIRKAMPKQGDGLDISERFVRYLKKTDNNEAFYELLQEEMFKK
Complex: NACID_G_1(1XPO) / Model_4(1XPO/A) = [4.2] Download--MAKLSIAYLESLTIKDIYSLAKEHKIAYYSKLTKRELIFALLKSNAEKEGFFFMEGVLEIIPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDRVSGKVRPPKENERYFGLLHVEAVNGENPEVAKERVHFPGLTPLYPDRQIHLETEKYPISTRTIDLIAPIGFGQRGLIVAPPKAGKTVLLKEIANAITTNHPDTELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHIKVAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFPAIDMRRSGTRKEELLLSKERLEQLWKIRKAMPKQGDGLDISERFVRYLKKTDNNEAFYELLQEEMFKK
Complex: NACID_L_6(1XPO) / Model_31(1XPO/F) = [4.3] Download--MAKLSIAYLESLTIKDIYSLAKEHKIAYYSKLTKRELIFALLKSNAEKEGFFFMEGVLEIIPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDRVSGKVRPPKENERYFGLLHVEAVNGENPEVAKERVHFPGLTPLYPDRQIHLETEKYPISTRTIDLIAPIGFGQRGLIVAPPKAGKTVLLKEIANAITTNHPDTELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHIKVAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFPAIDMRRSGTRKEELLLSKERLEQLWKIRKAMPKQGDGLDISERFVRYLKKTDNNEAFYELLQEEMFKK
Complex: NACID_K_4(2HT1) / Model_5(2HT1/A) = [4.4] Download--MAKLSIAYLESLTIKDIYSLAKEHKIAYYSKLTKRELIFALLKSNAEKEGFFFMEGVLEIIPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDRVSGKVRPPKENERYFGLLHVEAVNGENPEVAKERVHFPGLTPLYPDRQIHLETEKYPISTRTIDLIAPIGFGQRGLIVAPPKAGKTVLLKEIANAITTNHPDTELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHIKVAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFPAIDMRRSGTRKEELLLSKERLEQLWKIRKAMPKQGDGLDISERFVRYLKKTDNNEAFYELLQEEMFKK
Consensus
[pKd Mean = 4.10]
-0
(s=0)
0
(s=0)
MAKLSIAYLESLTIKDIYSLAKEHKIAYYSKLTKRELIFALLKSNAEKEGFFFMEGVLEIIPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDRVSGKVRPPKENERYFGLLHVEAVNGENPEVAKERVHFPGLTPLYPDRQIHLETEKYPISTRTIDLIAPIGFGQRGLIVAPPKAGKTVLLKEIANAITTNHPDTELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHIKVAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFPAIDMRRSGTRKEELLLSKERLEQLWKIRKAMPKQGDGLDISERFVRYLKKTDNNEAFYELLQEEMFKK