@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2600: (2016-04-05 )
MEIKLEQLGYCYQKNSPFEKRALLDVNVSFDSGSYSAIIGHTGSGKSTLLQHLNALLMPTEGKITVGDREIVAGVKQKKLRDLRKKVGIVFQFPEAQLFEETVEKDICFGPMNFGVSEEDAKLRAKKVIYEVGLTEEILSRSPFELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTVLVTHSMEDAARYAEKIVLMKAGTVLQIGTPREIFAKPDELVDLGLSVPDVVRFQGLFERKFDVKLTKTCLTIDELTTEMAPYLAKGGA

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ADP_B_9(4HLU)
ECFA2_THEMA
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]




ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ADP_A_5(4HLU)
ECFA2_THEMA
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ADP_C_11(4HLU)
ECFA1_THEMA
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ANP_A_6(4ZIR)
ECFA2_THEMA
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_D_7(4HLU)
ECFA1_THEMA
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ADP_A_4(1G6H)
LIVG_METJA
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




1 PsiBlast_PDB 92.3051%-106 - C1 -4HUQ - ECFA2_LACBA -
2 PsiBlast_PDB 90.5751%-100 - C1 -4HZU - ECFA2_LACBA -
3 PsiBlast_PDB 88.7549%-101 - C1 -4MKI - ECFA2_CALS4 -
21 PsiBlast_CBE 87.8149%-102 - C1 -4MKI 4.0 ECFA2_CALS4
4 PsiBlast_PDB 78.0536%-114 - C1 -3GFO - ECFA3_CLOP1 -
115 HHSearch 76.5137%-110 - C1 -3GFO - ECFA3_CLOP1 -
62 PsiBlast_CBE 65.0434% -96 - C1 -3FVQ 5.8 FBPC_NEIG1
131 Fugue 63.6233% -99 - C1 -1B0U - HISP_SALTY -
5 PsiBlast_PDB 63.2134% -96 - C1 -2YZ2 - ECFA2_THEMA -
122 HHSearch 63.0736%-102 * C1 *2OLJ - ? -
63 PsiBlast_CBE 62.7934% -98 - C1 -3FVQ 5.5 FBPC_NEIG1
109 HHSearch 62.3034% -94 - C1 -3FVQ 6.8 FBPC_NEIG1
6 PsiBlast_PDB 61.7734% -93 - C1 -4HLU 5.8 ECFA2_THEMA
108 HHSearch 61.4532%-108 - C1 -1V43 - ? -
129 Fugue 61.3630% -80 - C1 -1Z47 - ? -
51 PsiBlast_CBE 61.3336%-104 - C1 -1L2T 4.3 Y796_METJA
105 HHSearch 61.1034%-102 - C1 -1Z47 - ? -
111 HHSearch 60.7928% -98 - C1 -1OXX - ? -
22 PsiBlast_CBE 60.7534% -92 - C1 -4HLU 6.4 ECFA2_THEMA
55 PsiBlast_CBE 60.4836%-108 - C1 -3TIF 4.5 Y796_METJA
56 PsiBlast_CBE 59.2836%-104 - C1 -3TIF 4.3 Y796_METJA
10 PsiBlast_PDB 58.9036% -95 - C1 -4U00 4.2 ?
52 PsiBlast_CBE 58.7036%-105 - C1 -1L2T 4.2 Y796_METJA
14 PsiBlast_PDB 58.1736%-112 - C1 -4YMU 4.5 ?
15 PsiBlast_PDB 57.8036%-109 - C1 -4YMV 3.5 ?
29 PsiBlast_CBE 57.6236%-113 - C1 -4YMU 4.0 ?
32 PsiBlast_CBE 57.1636%-100 - C1 -3C4J 4.6 ?
28 PsiBlast_CBE 56.8536%-109 - C1 -4YMV 3.5 ?
40 PsiBlast_CBE 56.7436%-103 - C1 -2OLK 3.9 ?
30 PsiBlast_CBE 56.2436%-107 - C1 -3C41 3.4 ?
104 PsiBlast_CBE 55.9731% -97 - C1 -1G6H 4.5 LIVG_METJA
19 PsiBlast_PDB 55.9736%-102 - C1 -2OLK 3.8 ?
18 PsiBlast_PDB 55.0936%-103 - C1 -2OLJ 3.9 ?
38 PsiBlast_CBE 54.8936%-103 - C1 -2OLK 4.1 ?
17 PsiBlast_PDB 54.7836%-100 - C1 -3C41 4.6 ?
39 PsiBlast_CBE 54.4336%-106 - C1 -2OLK 4.1 ?
34 PsiBlast_CBE 53.8836% -98 - C1 -2Q0H 3.3 ?
31 PsiBlast_CBE 53.3636%-107 - C1 -3C4J 4.1 ?
98 PsiBlast_CBE 53.0132% -89 - C1 -2HYD 4.2 Y1866_STAAM
7 PsiBlast_PDB 52.8934% -96 - C1 -4ZIR 6.3 ECFA2_THEMA
99 PsiBlast_CBE 52.8832% -89 - C1 -2HYD 4.3 Y1866_STAAM
33 PsiBlast_CBE 50.5936%-104 - C1 -2Q0H 3.8 ?
41 PsiBlast_CBE 49.6636% -96 - C1 -2OLJ 3.6 ?
61 PsiBlast_CBE 44.3235%-102 - C1 -1B0U 3.3 HISP_SALTY
60 PsiBlast_CBE 40.2140%-100 - C1 -4HLU 4.1 ECFA1_THEMA
59 PsiBlast_CBE 37.9640%-100 - C1 -4HLU 3.6 ECFA1_THEMA