@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2611: (2016-04-05 )
LKLVLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGRKAKSFMDNGDLVPDEVTNGIVRERLSEDDAKDGFLLDGFPRTVEQAQELENILSDLGTELDAVINIDVEKDVLMKRLTGRWICRTCGKTYHEIYNPPKVPGKCDLDGGELYQRDDDKKETVEKRLNVNMKQTKPLLDFYSEKGKLHNINGEQEIKDVFVDVEKILASF

Atome Classification :

(99 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AP5_A_7(2OO7)
KAD_BACSU
[Raw transfer]




AP5_B_9(3X2S)
?
[Raw transfer]




AP5_A_7(3DL0)
KAD_BACSU
[Raw transfer]




AP5_A_3(3BE4)
?
[Raw transfer]




AP5_A_8(2EU8)
KAD_BACSU
[Raw transfer]




AP5_A_3(4QBF)
KAD_BACSU
[Raw transfer]




AP5_A_7(2OSB)
KAD_BACSU
[Raw transfer]




AP5_A_4(2P3S)
KAD_BACSU
[Raw transfer]




AP5_B_9(2EU8)
KAD_BACSU
[Raw transfer]




AP5_B_7(4TYP)
KAD_BACSU
[Raw transfer]




AP5_B_6(4NU0)
KAD_STRP2
[Raw transfer]




AP5_A_7(2ORI)
KAD_BACSU
[Raw transfer]




AP5_A_4(1ZIO)
KAD_GEOSE
[Raw transfer]




AP5_B_11(4MKF)
KAD_BACSU
[Raw transfer]




AP5_A_3(4TYQ)
KAD_BACSU
[Raw transfer]




AP5_A_4(1ZIP)
KAD_GEOSE
[Raw transfer]




AP5_B_8(2OO7)
KAD_BACSU
[Raw transfer]




AP5_A_7(2QAJ)
KAD_BACSU
[Raw transfer]




AP5_B_8(3DL0)
KAD_BACSU
[Raw transfer]




AP5_A_4(4MKG)
KAD_BACSU
[Raw transfer]




AP5_B_7(4TYQ)
KAD_BACSU
[Raw transfer]




AP5_A_3(4MKH)
KAD_BACSU
[Raw transfer]




AP5_A_3(3BE4)
?
[Raw transfer]




AP5_B_8(2QAJ)
KAD_BACSU
[Raw transfer]




AP5_A_3(3HPQ)
KAD_ECOLI
[Raw transfer]




AP5_B_3(4QBG)
KAD_BACSU
[Raw transfer]




AP5_B_6(4X8L)
?
[Raw transfer]




AP5_B_4(3HPR)
KAD_ECOLI
[Raw transfer]




B4P_A_3(2C95)
KAD1_HUMAN
[Raw transfer]




AP5_A_3(1ZIN)
KAD_GEOSE
[Raw transfer]




AP5_A_4(3DKV)
KAD_BACSU
[Raw transfer]




AP5_A_3(4QBH)
KAD_GEOSE
[Raw transfer]




AP5_A_4(1P3J)
KAD_BACSU
[Raw transfer]




AP5_B_8(2ORI)
KAD_BACSU
[Raw transfer]




AP5_B_6(4QBH)
KAD_GEOSE
[Raw transfer]




AP5_A_5(4QBI)
KAD_GEOSE
[Raw transfer]




AP5_A_3(1E4Y)
KAD_ECOLI
[Raw transfer]




AP5_A_3(1ZAK)
KADC_MAIZE
[Raw transfer]




AP5_A_6(2RGX)
KAD_AQUAE
[Raw transfer]




AP5_B_6(4X8O)
?
[Raw transfer]




AP5_B_8(2OSB)
KAD_BACSU
[Raw transfer]




AP5_B_4(3HPQ)
KAD_ECOLI
[Raw transfer]




AP5_A_3(3FB4)
?
[Raw transfer]




AP5_A_3(1S3G)
KAD_SPOGL
[Raw transfer]




AP5_A_3(4X8O)
?
[Raw transfer]




AP5_A_3(1AKE)
KAD_ECOLI
[Raw transfer]




AP5_B_8(4QBI)
KAD_GEOSE
[Raw transfer]




AP5_A_3(1ZAK)
KADC_MAIZE
[Raw transfer]




AP5_B_4(1ZAK)
KADC_MAIZE
[Raw transfer]




AP5_A_5(4MKF)
KAD_BACSU
[Raw transfer]




AP5_B_4(1E4V)
KAD_ECOLI
[Raw transfer]




AP5_B_4(1AKE)
KAD_ECOLI
[Raw transfer]




AP5_A_9(4TYP)
KAD_BACSU
[Raw transfer]




AP5_A_3(1E4V)
KAD_ECOLI
[Raw transfer]




AP5_A_3(3HPR)
KAD_ECOLI
[Raw transfer]




AP5_A_5(3X2S)
?
[Raw transfer]




AP5_B_4(1E4Y)
KAD_ECOLI
[Raw transfer]




GP5_B_4(2BBW)
KAD4_HUMAN
[Raw transfer]




GP5_A_3(2BBW)
KAD4_HUMAN
[Raw transfer]




ANP_B_6(1ANK)
KAD_ECOLI
[Raw transfer]




ADP_B_6(4JLP)
KAD_AQUAE
[Raw transfer]




ATF_A_3(1DVR)
KAD2_YEAST
[Raw transfer]




ATF_B_4(1DVR)
KAD2_YEAST
[Raw transfer]




ADP_B_6(4CF7)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JL8)
KAD_AQUAE
[Raw transfer]




ADP_B_7(4JKY)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4JLA)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4IKE)
KAD_AQUAE
[Raw transfer]




ADP_B_7(3SR0)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4CF7)
KAD_AQUAE
[Raw transfer]




ADP_A_4(1QF9)
KCY_DICDI
[Raw transfer]




ADP_B_6(4JL5)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4JLB)
KAD_AQUAE
[Raw transfer]




ADP_A_11(3TLX)
?
[Raw transfer]




ADP_A_4(4JLA)
KAD_AQUAE
[Raw transfer]




ADP_A_11(3TLX)
?
[Raw transfer]




B4P_A_2(2C9Y)
KAD2_HUMAN
[Raw transfer]




ADP_A_4(4JLO)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLD)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLB)
KAD_AQUAE
[Raw transfer]




ADP_B_6(2ECK)
KAD_ECOLI
[Raw transfer]




ADP_A_4(4JL6)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLP)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4JL8)
KAD_AQUAE
[Raw transfer]




ADP_A_2(4K46)
KAD_PHOPR
[Raw transfer]




ADP_B_2(1UKZ)
KCY_YEAST
[Raw transfer]




ADP_A_4(2CDN)
KAD_MYCTU
[Raw transfer]




ADP_A_4(2CDN)
KAD_MYCTU
[Raw transfer]




ADP_A_4(4JKY)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4IKE)
KAD_AQUAE
[Raw transfer]




ADP_B_5(4JZK)
?
[Raw transfer]




ADP_A_3(4JZK)
?
[Raw transfer]




ADP_B_9(3TLX)
?
[Raw transfer]




ADP_B_6(4JL6)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4JLO)
KAD_AQUAE
[Raw transfer]




AMP_A_5(2AK3)
KAD3_BOVIN
[Raw transfer]




AMP_B_6(2AK3)
KAD3_BOVIN
[Raw transfer]




SRT_A_3(2XB4)
?
[Raw transfer]




TRS_A_2(4W5H)
KAD_STRP2
[Raw transfer]




TRS_A_4(4W5H)
KAD_STRP2
[Raw transfer]




34 PsiBlast_CBE 91.8964% -83 - C3 -4QBG 13.7 KAD_BACSU
3 PsiBlast_PDB 91.7367% -81 - C3 -1ZIN 14.7 KAD_GEOSE
33 PsiBlast_CBE 91.0366% -84 - C3 -4TYQ 14.8 KAD_BACSU
22 PsiBlast_CBE 91.0269% -85 - C3 -4MKF 15.2 KAD_BACSU
18 PsiBlast_PDB 90.7268% -78 - C3 -4MKG 15.5 KAD_BACSU
25 PsiBlast_CBE 90.6268% -82 - C3 -2QAJ 15.2 KAD_BACSU
12 PsiBlast_PDB 90.6268% -78 - C3 -2ORI 14.6 KAD_BACSU
27 PsiBlast_CBE 90.5268% -79 - C3 -2OO7 15.6 KAD_BACSU
1 PsiBlast_PDB 90.5172% -84 - C3 -3FB4 15.4 ?
17 PsiBlast_PDB 90.3968% -83 - C3 -3DKV 15.2 KAD_BACSU
4 PsiBlast_PDB 90.3967% -83 - C3 -1ZIO 14.2 KAD_GEOSE
19 PsiBlast_PDB 90.3667% -83 - C3 -4QBF 14.3 KAD_BACSU
5 PsiBlast_PDB 89.9567% -82 - C3 -1ZIP 14.8 KAD_GEOSE
8 PsiBlast_PDB 89.8168% -79 - C3 -2EU8 14.5 KAD_BACSU
10 PsiBlast_PDB 89.7368% -81 - C3 -3DL0 15.2 KAD_BACSU
13 PsiBlast_PDB 89.4868% -78 - C3 -2OO7 15.7 KAD_BACSU
2 PsiBlast_PDB 89.4269% -83 - C3 -4QBI 14.9 KAD_GEOSE
7 PsiBlast_PDB 89.3569% -79 - C3 -4MKF 15.7 KAD_BACSU
23 PsiBlast_CBE 88.8568% -77 - C3 -2EU8 14.9 KAD_BACSU
28 PsiBlast_CBE 88.8368% -78 - C3 -2OSB 14.9 KAD_BACSU
24 PsiBlast_CBE 88.7568% -81 - C3 -3DL0 15.1 KAD_BACSU
14 PsiBlast_PDB 88.6168% -77 - C3 -2OSB 14.3 KAD_BACSU
20 PsiBlast_PDB 88.6068% -78 - C3 -4MKH 14.3 KAD_BACSU
31 PsiBlast_CBE 88.5366% -85 - C3 -4TYP 13.9 KAD_BACSU
9 PsiBlast_PDB 88.3968% -79 - C3 -2P3S 14.8 KAD_BACSU
11 PsiBlast_PDB 88.3868% -79 - C3 -2QAJ 14.8 KAD_BACSU
26 PsiBlast_CBE 88.1468% -78 - C3 -2ORI 15.0 KAD_BACSU
32 PsiBlast_CBE 87.4266% -80 - C3 -4TYQ 14.9 KAD_BACSU
21 PsiBlast_CBE 87.3769% -82 - C3 -4QBI 15.8 KAD_GEOSE
16 PsiBlast_PDB 87.0466% -78 - C3 -1S3G 15.0 KAD_SPOGL
29 PsiBlast_CBE 86.9468% -78 - C3 -4QBH 15.5 KAD_GEOSE
6 PsiBlast_PDB 86.3769% -77 - C3 -1P3J 14.9 KAD_BACSU
30 PsiBlast_CBE 86.2566% -79 - C3 -4TYP 12.8 KAD_BACSU
15 PsiBlast_PDB 86.0168% -74 - C3 -4QBH 14.7 KAD_GEOSE
38 PsiBlast_CBE 85.5356% -96 - C3 -4W5H 3.4 KAD_STRP2
39 PsiBlast_CBE 81.4556% -81 - C3 -4NU0 14.9 KAD_STRP2
64 PsiBlast_CBE 81.4141% -90 - C3 -2C9Y 7.4 KAD2_HUMAN
84 PsiBlast_CBE 76.0839% -82 - C3 -4IKE 6.8 KAD_AQUAE
112 HHSearch 75.6344% -72 - C3 -3BE4 14.5 ?
65 PsiBlast_CBE 75.3040% -77 - C3 -1DVR 8.4 KAD2_YEAST
76 PsiBlast_CBE 75.2039% -76 - C3 -4JLA 7.3 KAD_AQUAE
80 PsiBlast_CBE 74.6639% -71 - C3 -4JL6 7.5 KAD_AQUAE
83 PsiBlast_CBE 74.6239% -77 - C3 -4JKY 7.0 KAD_AQUAE
61 PsiBlast_CBE 74.6044% -71 - C3 -3BE4 14.5 ?
81 PsiBlast_CBE 74.3939% -77 - C3 -4JL5 8.9 KAD_AQUAE
79 PsiBlast_CBE 74.3439% -75 - C3 -4JL6 7.7 KAD_AQUAE
66 PsiBlast_CBE 74.3140% -75 - C3 -1DVR 8.9 KAD2_YEAST
92 PsiBlast_CBE 74.1238% -81 - C3 -4JLO 7.8 KAD_AQUAE
85 PsiBlast_CBE 74.1239% -76 - C3 -4IKE 9.2 KAD_AQUAE
74 PsiBlast_CBE 74.1239% -77 - C3 -4JLB 7.9 KAD_AQUAE
82 PsiBlast_CBE 73.9639% -77 - C3 -4JKY 7.3 KAD_AQUAE
77 PsiBlast_CBE 73.8639% -75 - C3 -4JL8 9.2 KAD_AQUAE
90 PsiBlast_CBE 73.4538% -80 - C3 -4JLP 9.3 KAD_AQUAE
93 PsiBlast_CBE 73.1838% -75 - C3 -4JLO 7.7 KAD_AQUAE
73 PsiBlast_CBE 73.0839% -75 - C3 -4JLB 9.6 KAD_AQUAE
75 PsiBlast_CBE 73.0039% -72 - C3 -4JLA 8.0 KAD_AQUAE
72 PsiBlast_CBE 72.9339% -73 - C3 -4JLD 8.3 KAD_AQUAE
91 PsiBlast_CBE 72.8238% -74 - C3 -4JLP 7.7 KAD_AQUAE
70 PsiBlast_CBE 72.7742% -72 - C3 -2AK3 5.0 KAD3_BOVIN
53 PsiBlast_CBE 72.6145% -66 - C3 -4X8O 15.2 ?
88 PsiBlast_CBE 72.5139% -75 - C3 -3SR0 8.7 KAD_AQUAE
78 PsiBlast_CBE 72.4439% -73 - C3 -4JL8 8.4 KAD_AQUAE
86 PsiBlast_CBE 72.2539% -73 - C3 -4CF7 9.4 KAD_AQUAE
89 PsiBlast_CBE 71.9739% -70 - C3 -2RGX 13.8 KAD_AQUAE
69 PsiBlast_CBE 71.8642% -69 - C3 -2AK3 5.6 KAD3_BOVIN
41 PsiBlast_CBE 71.1247% -59 - C3 -4K46 10.2 KAD_PHOPR
56 PsiBlast_CBE 70.8345% -64 - C3 -4X8L 14.5 ?
52 PsiBlast_CBE 70.0445% -65 - C3 -4X8O 15.3 ?
55 PsiBlast_CBE 70.0245% -64 - C3 -3HPR 13.8 KAD_ECOLI
49 PsiBlast_CBE 69.8945% -62 - C3 -1AKE 13.8 KAD_ECOLI
43 PsiBlast_CBE 69.8445% -62 - C3 -4JZK 8.1 ?
123 HHSearch 69.6843% -83 - C3 -2CDN 8.3 KAD_MYCTU
87 PsiBlast_CBE 69.6839% -68 - C3 -4CF7 7.1 KAD_AQUAE
116 HHSearch 69.1636% -78 - C3 -2XB4 2.4 ?
54 PsiBlast_CBE 69.0945% -64 - C3 -3HPR 12.7 KAD_ECOLI
45 PsiBlast_CBE 68.8945% -64 - C3 -3HPQ 13.8 KAD_ECOLI
59 PsiBlast_CBE 68.7844% -65 - C3 -1E4Y 13.9 KAD_ECOLI
48 PsiBlast_CBE 68.7145% -65 - C3 -1AKE 14.9 KAD_ECOLI
111 HHSearch 68.6638% -65 - C3 -3TLX 6.8 ?
60 PsiBlast_CBE 68.6544% -66 - C3 -1E4Y 13.4 KAD_ECOLI
58 PsiBlast_CBE 68.5145% -60 - C3 -1E4V 14.4 KAD_ECOLI
50 PsiBlast_CBE 68.4745% -60 - C3 -3X2S 14.3 ?
44 PsiBlast_CBE 68.4445% -64 - C3 -3HPQ 14.0 KAD_ECOLI
46 PsiBlast_CBE 68.3545% -62 - C3 -2ECK 8.3 KAD_ECOLI
51 PsiBlast_CBE 67.6445% -59 - C3 -3X2S 13.6 ?
98 PsiBlast_CBE 67.4236% -80 - C3 -2CDN 8.2 KAD_MYCTU
57 PsiBlast_CBE 66.7345% -60 - C3 -1E4V 14.7 KAD_ECOLI
42 PsiBlast_CBE 66.4345% -63 - C3 -4JZK 8.1 ?
67 PsiBlast_CBE 66.3339% -62 - C3 -3TLX 6.7 ?
119 HHSearch 65.9139% -60 - C3 -1ZAK 12.6 KADC_MAIZE
96 PsiBlast_CBE 65.3538% -58 - C3 -2BBW 4.6 KAD4_HUMAN
47 PsiBlast_CBE 65.3045% -59 - C3 -1ANK 8.5 KAD_ECOLI
97 PsiBlast_CBE 64.6538% -56 - C3 -2BBW 11.8 KAD4_HUMAN
68 PsiBlast_CBE 64.3039% -57 - C3 -3TLX 6.8 ?
94 PsiBlast_CBE 64.2837% -63 - C3 -1ZAK 12.8 KADC_MAIZE
95 PsiBlast_CBE 64.1137% -63 - C3 -1ZAK 12.6 KADC_MAIZE
126 HHSearch 63.5032% -64 - C3 -1UKZ 8.3 KCY_YEAST
122 HHSearch 58.5834% -65 * C3 *2C95 13.5 KAD1_HUMAN
127 HHSearch 58.3130% -63 - C3 -1QF9 7.3 KCY_DICDI