@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2695: (2016-04-06 )
MKKILNGTDQVVEQMVEGLVKSHADVVHRVEGTRVIARNDKRPGKVGLVSGGGSGHEPAHAGYVGRGMLSAAVCGDVFTSPTPDQIYEGIKAADQGAGVLLIVKNYTGDVMNFEMAADLADADDIKVEQIVVDDDIAVEDSTFTTGRRGVAGTVLVHKIIGAAAEAGASLDELKALGEKVIASVKTLGVALSPCTVPEVGHPGFELGDDEIELGIGIHGEPGFTREKIMPSASLAKQLYERISNESKLLAGDKVVVLVNGMGATPLMEQYVFANDVHELLKNAGVQVEKTLVGDYMTSLEMAGLSLTILKLEDEKWVDMLKLPVDTIAW

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_3(2IU6)
DHAQ_LACLA
[Raw transfer]




GOL_B_4(2IU6)
DHAQ_LACLA
[Raw transfer]




GOL_B_6(4LRY)
DHAK_ECOLI
[Raw transfer]




GOL_A_5(4LRY)
DHAK_ECOLI
[Raw transfer]




GOL_A_5(4LRX)
DHAK_ECOLI
[Raw transfer]




GOL_A_3(3PNK)
DHAK_ECOLI
[Raw transfer]




GOL_B_6(4LRX)
DHAK_ECOLI
[Raw transfer]




GOL_B_4(3PNK)
DHAK_ECOLI
[Raw transfer]




GOL_A_5(1OI2)
DHAK_ECOLI
[Raw transfer]




GOL_A_5(1OI2)
DHAK_ECOLI
[Raw transfer]




GOL_B_6(1OI2)
DHAK_ECOLI
[Raw transfer]




GOL_A_5(1OI2)
DHAK_ECOLI
[Raw transfer]




GOL_A_3(1UOE)
DHAK_ECOLI
[Raw transfer]




GOL_B_5(1UOE)
DHAK_ECOLI
[Raw transfer]




G3H_B_6(1UOD)
DHAK_ECOLI
[Raw transfer]




2HA_B_5(3CT4)
DHAK_LACLA
[Raw transfer]




2HA_A_4(3CT4)
DHAK_LACLA
[Raw transfer]




2HA_C_6(3CT4)
DHAK_LACLA
[Raw transfer]




2HA_A_4(3CT4)
DHAK_LACLA
[Raw transfer]




G3H_A_5(1UOD)
DHAK_ECOLI
[Raw transfer]




2HA_B_10(1UN9)
DHAK_CITFR
[Raw transfer]




2HA_A_6(1UN9)
DHAK_CITFR
[Raw transfer]




HIQ_A_7(2IU4)
DHAQ_LACLA
[Raw transfer]




HIQ_A_7(2IU4)
DHAQ_LACLA
[Raw transfer]




ADP_B_4(3PNL)
DHAK_ECOLI
[Raw transfer]




37 HHSearch 99.6161%-103 - C6 -3CT4 2.7 DHAK_LACLA
1 PsiBlast_PDB 99.2860%-103 - C6 -3CT4 2.7 DHAK_LACLA
21 PsiBlast_CBE 99.0160%-101 - C6 -3CT4 2.5 DHAK_LACLA
22 PsiBlast_CBE 99.0060%-102 - C6 -3CT4 2.6 DHAK_LACLA
54 Fugue 92.4145% -98 * C6 *1OI2 2.4 DHAK_ECOLI
39 HHSearch 92.3246% -98 - C6 -1OI2 2.4 DHAK_ECOLI
23 PsiBlast_CBE 90.2844% -84 - C6 -1UOE 2.5 DHAK_ECOLI
25 PsiBlast_CBE 90.2444% -87 - C6 -1OI3 - DHAK_ECOLI -
13 PsiBlast_PDB 90.0741% -98 - C6 -2IU6 2.8 DHAQ_LACLA
2 PsiBlast_PDB 90.0544% -85 - C6 -1UOE 2.6 DHAK_ECOLI
31 PsiBlast_CBE 89.9041% -95 - C6 -2IU6 3.1 DHAQ_LACLA
3 PsiBlast_PDB 89.8844% -84 - C6 -1OI2 2.4 DHAK_ECOLI
24 PsiBlast_CBE 89.8744% -85 - C6 -1UOD 3.2 DHAK_ECOLI
12 PsiBlast_PDB 89.7243% -88 - C6 -3PNM - DHAK_ECOLI -
26 PsiBlast_CBE 89.6944% -85 - C6 -1OI2 2.5 DHAK_ECOLI
5 PsiBlast_PDB 89.5844% -83 - C6 -1UOD 3.2 DHAK_ECOLI
9 PsiBlast_PDB 89.4844% -84 - C6 -4LRY 3.1 DHAK_ECOLI
6 PsiBlast_PDB 89.4844% -84 - C6 -4LRX 3.5 DHAK_ECOLI
28 PsiBlast_CBE 89.4344% -84 - C6 -3PNK 2.4 DHAK_ECOLI
8 PsiBlast_PDB 89.4144% -82 - C6 -3PNL 3.4 DHAK_ECOLI
7 PsiBlast_PDB 89.3644% -84 - C6 -3PNK 2.9 DHAK_ECOLI
29 PsiBlast_CBE 89.2244% -84 - C6 -4LRY 3.3 DHAK_ECOLI
27 PsiBlast_CBE 89.1144% -83 - C6 -4LRX 3.0 DHAK_ECOLI
34 PsiBlast_CBE 82.9836% -86 - C6 -1UN9 2.2 DHAK_CITFR
16 PsiBlast_PDB 82.9636% -87 - C6 -1UN9 2.4 DHAK_CITFR
38 HHSearch 69.5241% -83 - C6 -2IU4 24.4 DHAQ_LACLA
14 PsiBlast_PDB 69.4240% -86 - C6 -2IU4 24.3 DHAQ_LACLA