@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2723: (2016-04-06 )
VEIKQIKAKDTQDIRHRVLRPEQPEENAIYPNDDMEGTFHLGAFEKDVLLGVASFYPEKSTVIMNPAQYRIRGVATERRMRLKGLGTALLAEGEAEIWTRGADIIWCNARIVAVGFYEKHGYRKVGKSFVIPGIGEHYLMKKVNPNKKVDQDN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3PG_A_3(2JDD)
?
[Raw transfer]




2 PsiBlast_PDB 94.1240% -67 - C3 -2JDD 3.8 ?
1 PsiBlast_PDB 93.5440% -66 - C3 -2JDC - ? -
3 PsiBlast_PDB 92.9439% -65 - C3 -2BSW - ? -
22 Fugue 92.5838% -71 - C3 -2BSW - ? -
32 HHSearch 91.5039% -64 - C3 -2JDC - ? -
23 Fugue 66.6421% -68 - C3 -1Q2Y - YJCF_BACSU -
48 HHSearch 63.1618% -55 - C3 -2FIA - ? -
49 HHSearch 63.1419% -55 - C3 -1Z4E - ? -
40 HHSearch 62.9015% -56 - C3 -1MK4 - YQJY_BACSU -
47 HHSearch 61.6020% -55 - C3 -2FIW - ? -
45 HHSearch 59.9925% -61 - C3 -1N71 - ? -
29 Fugue 57.8015% -59 - C3 -1I12 - GNA1_YEAST -
50 HHSearch 57.4116% -50 - C3 -1TIQ - PAIA_BACSU -
27 Fugue 56.5820% -41 - C3 -1B87 - ? -
35 HHSearch 56.0920% -52 - C3 -1Q2Y - YJCF_BACSU -
39 HHSearch 54.3318% -38 - C3 -1XEB - ? -
51 HHSearch 52.8715% -46 - C3 -3F5B - ? -
34 HHSearch 52.2013% -53 - C3 -2DXQ - ? -
42 HHSearch 51.3316% -48 - C3 -3LOD - ? -
37 HHSearch 50.7717% -50 * C3 *2CNT - ? -