@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2761: (2016-04-07 )
MEHNKLKPFPKDFLWGSASAAYQVEGAWDEDGKGPSVWDEFVRIPGTTFKETNGDVAVDNYHRYKEDVALMAEQGLKAYRFSVAWSRVIPHGNGEVNEAGLKFYDNLIDELLSYGIEPVVTLYHWDIPQGLQDEYGGWESRKVVEDFTNYAALLFERFNGRVKYWVTLNEQNVFISHGYKLAYHPPGVSDDKRMFAANHNANLANASAIAKFRELGTSGKIGPSFAYGPSYSIDANPANVLASENSEEFNAHFWMDVYTWGEYPTATWNWLEEHGLAPEILPGDTELLKKGKPDFMGVNYYRSMTHAFNGKDGVGSGKMNTTGEKGTSEETGVPGLYKNTNNPYLEKTNWDWDIDPTGLRIGLRRITNRYKLPIMITENGLGEYDSLTEDHKIHDEYRIEYIRAHALAIQEAITDGVEMLGYCTWSFTDLLSWLNGYQKRYGFVYVDRDENDEKELKRYKKDSFYWYKKTIEANGANLVEEQGK

Atome Classification :

(71 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IDE_B_5(2J7C)
BGLA_THEMA
[Raw transfer]




GOX_A_7(2J78)
BGLA_THEMA
[Raw transfer]




GOX_A_7(2J78)
BGLA_THEMA
[Raw transfer]




GIM_B_7(2CES)
BGLA_THEMA
[Raw transfer]




PGI_B_6(2CET)
BGLA_THEMA
[Raw transfer]




GI1_B_5(2J7D)
BGLA_THEMA
[Raw transfer]




GIM_A_4(2CES)
BGLA_THEMA
[Raw transfer]




BGC_A_2(4HZ8)
?
[Raw transfer]




NOY_B_6(2J75)
BGLA_THEMA
[Raw transfer]




GOX_B_9(2J78)
BGLA_THEMA
[Raw transfer]




GI4_B_5(2J7G)
BGLA_THEMA
[Raw transfer]




NTZ_B_5(2J7B)
BGLA_THEMA
[Raw transfer]




TCB_B_6(4PTV)
?
[Raw transfer]




NOY_A_4(2J75)
BGLA_THEMA
[Raw transfer]




GI4_A_3(2J7G)
BGLA_THEMA
[Raw transfer]




BG6_B_7(4F66)
?
[Raw transfer]




GI2_B_5(2J7E)
BGLA_THEMA
[Raw transfer]




NOJ_A_3(1OIM)
BGLA_THEMA
[Raw transfer]




CGB_B_5(2CBV)
BGLA_THEMA
[Raw transfer]




IFL_A_3(1UZ1)
BGLA_THEMA
[Raw transfer]




CTS_B_6(2CBU)
BGLA_THEMA
[Raw transfer]




GTL_B_5(2J79)
BGLA_THEMA
[Raw transfer]




IFL_B_4(1UZ1)
BGLA_THEMA
[Raw transfer]




GTL_A_3(2J79)
BGLA_THEMA
[Raw transfer]




BGC_A_2(2E9L)
GBA3_HUMAN
[Raw transfer]




CTS_A_3(2CBU)
BGLA_THEMA
[Raw transfer]




BGC_A_2(3WH6)
?
[Raw transfer]




OXZ_A_3(1W3J)
BGLA_THEMA
[Raw transfer]




BGC_A_2(4HZ7)
?
[Raw transfer]




OXZ_B_4(1W3J)
BGLA_THEMA
[Raw transfer]




IFM_A_3(1OIF)
BGLA_THEMA
[Raw transfer]




IFM_B_4(1OIF)
BGLA_THEMA
[Raw transfer]




NOJ_B_5(2J77)
BGLA_THEMA
[Raw transfer]




NOJ_B_4(1OIM)
BGLA_THEMA
[Raw transfer]




AZF_B_7(2J7H)
BGLA_THEMA
[Raw transfer]




CGB_A_3(2CBV)
BGLA_THEMA
[Raw transfer]




GOL_A_3(3WH5)
?
[Raw transfer]




GOL_S_19(2DGA)
HGL1B_WHEAT
[Raw transfer]




SRT_A_24(3CMJ)
?
[Raw transfer]




YLL_B_6(2JAL)
BGLA_THEMA
[Raw transfer]




BTB_A_2(3VII)
?
[Raw transfer]




GOL_M_24(1E4M)
MYRA_SINAL
[Raw transfer]




GLC_A_2(3WBE)
BGL06_ORYSJ
[Raw transfer]




IFM_A_3(3WH8)
?
[Raw transfer]




FCB_A_2(3WH7)
?
[Raw transfer]




NCW_B_7(2VRJ)
BGLA_THEMA
[Raw transfer]




NCW_A_3(2VRJ)
BGLA_THEMA
[Raw transfer]




GLC_A_2(3WBA)
BGL06_ORYSJ
[Raw transfer]




G2F_A_9(1E4I)
BGLA_PAEPO
[Raw transfer]




G2F_A_3(1OIN)
BGLA_THEMA
[Raw transfer]




TRS_A_2(3W53)
?
[Raw transfer]




G2F_B_4(1OIN)
BGLA_THEMA
[Raw transfer]




G2F_A_2(3GNR)
BGL06_ORYSJ
[Raw transfer]




TRS_A_2(3GNO)
BGL06_ORYSJ
[Raw transfer]




14 PsiBlast_PDB 96.0239% -62 - C1 -4GZE - ? -
21 PsiBlast_CBE 95.8139% -66 - C1 -2XHY - BGLA_ECOLI -
1 PsiBlast_PDB 95.5439% -63 - C1 -2XHY - BGLA_ECOLI -
23 PsiBlast_CBE 95.3839% -64 - C1 -2XHY - BGLA_ECOLI -
22 PsiBlast_CBE 94.7739% -67 - C1 -2XHY - BGLA_ECOLI -
13 PsiBlast_PDB 94.5839% -60 - C1 -3QOM - ? -
27 PsiBlast_CBE 93.8039% -64 - C1 -4IPN - ? -
4 PsiBlast_PDB 93.4139% -66 - C1 -4IPL - ? -
5 PsiBlast_PDB 93.0939% -64 - C1 -4IPN - ? -
25 PsiBlast_CBE 92.5740% -63 - C1 -3AHX - ? -
24 PsiBlast_CBE 92.5040% -62 - C1 -3AHX - ? -
26 PsiBlast_CBE 92.3140% -63 - C1 -3AHX - ? -
32 PsiBlast_CBE 92.2337% -58 - C1 -4F66 5.5 ?
3 PsiBlast_PDB 92.0540% -63 - C1 -3AHX - ? -
112 HHSearch 91.9440% -58 - C1 -2XHY - BGLA_ECOLI -
12 PsiBlast_PDB 91.6537% -60 - C1 -4GPN - ? -
119 HHSearch 91.3837% -63 - C1 -1E4I 2.4 BGLA_PAEPO
117 HHSearch 91.3240% -61 * C1 *2J78 4.7 BGLA_THEMA
11 PsiBlast_PDB 91.2337% -59 - C1 -4F79 - ? -
33 PsiBlast_CBE 90.8937% -61 - C1 -4GPN - ? -
87 PsiBlast_CBE 90.6736% -58 - C1 -4HZ8 4.2 ?
63 PsiBlast_CBE 90.3237% -60 - C1 -2J79 4.0 BGLA_THEMA
88 PsiBlast_CBE 90.0636% -59 - C1 -4HZ7 4.0 ?
40 PsiBlast_CBE 89.6736% -60 - C1 -3CMJ 3.1 ?
75 PsiBlast_CBE 89.5137% -58 - C1 -2CBU 4.9 BGLA_THEMA
68 PsiBlast_CBE 89.1837% -59 - C1 -2J75 4.5 BGLA_THEMA
66 PsiBlast_CBE 89.0737% -58 - C1 -2J78 4.7 BGLA_THEMA
57 PsiBlast_CBE 88.9937% -59 - C1 -2J7G 5.4 BGLA_THEMA
60 PsiBlast_CBE 88.9137% -59 - C1 -2J7D 5.7 BGLA_THEMA
77 PsiBlast_CBE 88.7437% -58 - C1 -1W3J 3.8 BGLA_THEMA
69 PsiBlast_CBE 88.5537% -58 - C1 -2J75 4.4 BGLA_THEMA
72 PsiBlast_CBE 88.4637% -59 - C1 -2CES 4.8 BGLA_THEMA
65 PsiBlast_CBE 88.4437% -58 - C1 -2J78 4.7 BGLA_THEMA
81 PsiBlast_CBE 88.4237% -58 - C1 -1OIN 2.6 BGLA_THEMA
86 PsiBlast_CBE 88.2737% -56 - C1 -1OIF 4.0 BGLA_THEMA
76 PsiBlast_CBE 88.2637% -59 - C1 -2CBU 5.0 BGLA_THEMA
64 PsiBlast_CBE 88.1637% -58 - C1 -2J79 4.2 BGLA_THEMA
54 PsiBlast_CBE 88.0737% -59 - C1 -2VRJ 5.5 BGLA_THEMA
31 PsiBlast_CBE 88.0439% -58 - C1 -4PTV 4.3 ?
71 PsiBlast_CBE 88.0237% -58 - C1 -2CES 4.5 BGLA_THEMA
70 PsiBlast_CBE 87.9937% -59 - C1 -2CET 7.1 BGLA_THEMA
73 PsiBlast_CBE 87.9437% -57 - C1 -2CBV 4.2 BGLA_THEMA
59 PsiBlast_CBE 87.9437% -56 - C1 -2J7E 6.0 BGLA_THEMA
67 PsiBlast_CBE 87.8437% -58 - C1 -2J77 4.3 BGLA_THEMA
106 HHSearch 87.8039% -52 - C1 -3W53 3.1 ?
85 PsiBlast_CBE 87.7137% -57 - C1 -1OIF 3.7 BGLA_THEMA
58 PsiBlast_CBE 87.6637% -60 - C1 -2J7G 5.4 BGLA_THEMA
80 PsiBlast_CBE 87.6537% -58 - C1 -1UZ1 4.0 BGLA_THEMA
62 PsiBlast_CBE 87.5037% -59 - C1 -2J7B 4.6 BGLA_THEMA
56 PsiBlast_CBE 87.4037% -58 - C1 -2J7H 3.8 BGLA_THEMA
101 HHSearch 87.3734% -51 - C1 -2DGA 2.9 HGL1B_WHEAT
82 PsiBlast_CBE 87.2537% -55 - C1 -1OIN 3.2 BGLA_THEMA
74 PsiBlast_CBE 87.2137% -57 - C1 -2CBV 3.8 BGLA_THEMA
53 PsiBlast_CBE 87.1337% -58 - C1 -2VRJ 4.9 BGLA_THEMA
84 PsiBlast_CBE 86.9937% -58 - C1 -1OIM 4.4 BGLA_THEMA
78 PsiBlast_CBE 86.9937% -56 - C1 -1W3J 3.8 BGLA_THEMA
98 PsiBlast_CBE 86.9137% -60 - C1 -3WH5 2.6 ?
97 PsiBlast_CBE 86.9137% -59 - C1 -3WH6 4.0 ?
79 PsiBlast_CBE 86.7937% -57 - C1 -1UZ1 4.1 BGLA_THEMA
55 PsiBlast_CBE 86.5937% -57 - C1 -2JAL 3.7 BGLA_THEMA
95 PsiBlast_CBE 86.4337% -59 - C1 -3WH8 3.7 ?
83 PsiBlast_CBE 86.2037% -56 - C1 -1OIM 4.2 BGLA_THEMA
61 PsiBlast_CBE 86.1437% -57 - C1 -2J7C 6.9 BGLA_THEMA
92 PsiBlast_CBE 86.0735% -54 - C1 -3GNO 2.0 BGL06_ORYSJ
96 PsiBlast_CBE 85.1637% -57 - C1 -3WH7 3.5 ?
90 PsiBlast_CBE 85.1435% -53 - C1 -3GNR 2.4 BGL06_ORYSJ
93 PsiBlast_CBE 84.1835% -54 - C1 -3WBE 3.8 BGL06_ORYSJ
94 PsiBlast_CBE 82.9235% -54 - C1 -3WBA 3.1 BGL06_ORYSJ
115 HHSearch 81.7435% -53 - C1 -2E9L 3.1 GBA3_HUMAN
104 HHSearch 81.1831% -57 - C1 -1E4M 3.4 MYRA_SINAL
116 HHSearch 74.5734% -50 - C1 -3VII 3.3 ?