@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0007: (2015-11-27 )
MVKMIVGLGNPGSKYNDTKHNIGFMAVDRIVKDLDVNFTEDKNFKAEIGSDFINGEKIYFIKPTTFMNNSGIAVKALLTYYNISIKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAHLGTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMILNTLDKVDNAVNYYLQTNDFQKTMQKYNGLK

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_9(4IKO)
?
[Raw transfer]




GOL_A_9(4JY7)
?
[Raw transfer]




GOL_A_9(4HOY)
?
[Raw transfer]




0L1_A_3(4DHW)
PTH_PSEAE
[Raw transfer]




PML_B_4(4DJJ)
PTH_PSEAE
[Raw transfer]




5AE_A_2(4QD3)
PTH_PSEAE
[Raw transfer]




0L1_B_4(4DHW)
PTH_PSEAE
[Raw transfer]




3NZ_A_3(4QBK)
PTH_PSEAE
[Raw transfer]




PEG_B_4(4ERX)
PTH_PSEAE
[Raw transfer]




PML_A_3(4DJJ)
PTH_PSEAE
[Raw transfer]




GOL_B_8(4FNO)
PTH_PSEAE
[Raw transfer]




PEG_A_3(4ERX)
PTH_PSEAE
[Raw transfer]




URI_A_2(4JX9)
?
[Raw transfer]




EDO_A_4(3NEA)
PTH_FRATT
[Raw transfer]




EDO_A_4(3NEA)
PTH_FRATT
[Raw transfer]




CTN_A_2(4JWK)
?
[Raw transfer]




TLA_A_3(4OLJ)
?
[Raw transfer]




EDO_A_5(3KK0)
PTH_MYCS2
[Raw transfer]




PEG_A_9(3KK0)
PTH_MYCS2
[Raw transfer]




40 Fugue 96.7178%-110 - C2 -4QT4 - PTH_STRPZ -
1 PsiBlast_PDB 96.7178%-110 - C2 -4QT4 - PTH_STRPZ -
34 PsiBlast_CBE 85.6234% -94 - C2 -4DHW 3.1 PTH_PSEAE
28 PsiBlast_CBE 84.9434% -95 - C2 -4FNO 2.9 PTH_PSEAE
27 PsiBlast_CBE 84.9234% -96 - C2 -4JC4 - PTH_PSEAE -
25 PsiBlast_CBE 84.9134% -93 - C2 -4QD3 3.7 PTH_PSEAE
31 PsiBlast_CBE 84.6134% -95 - C2 -4ERX 3.0 PTH_PSEAE
35 PsiBlast_CBE 84.0234% -91 - C2 -4DHW 2.9 PTH_PSEAE
32 PsiBlast_CBE 84.0134% -93 - C2 -4DJJ 3.5 PTH_PSEAE
29 PsiBlast_CBE 83.9934% -94 - C2 -4FNO - PTH_PSEAE -
26 PsiBlast_CBE 83.9934% -91 - C2 -4QBK 6.3 PTH_PSEAE
33 PsiBlast_CBE 83.4934% -94 - C2 -4DJJ 2.9 PTH_PSEAE
30 PsiBlast_CBE 83.4134% -91 - C2 -4ERX 2.1 PTH_PSEAE
2 PsiBlast_PDB 82.4136%-113 - C2 -1RYN - CRS2_MAIZE -
49 HHSearch 80.2533% -96 - C2 -2PTH - PTH_ECOLI -
22 PsiBlast_CBE 80.1434%-102 - C2 -4JX9 4.0 ?
21 PsiBlast_CBE 79.9834%-103 - C2 -4JY7 Error ?
36 PsiBlast_CBE 79.9534%-103 - C2 -4OLJ 2.7 ?
24 PsiBlast_CBE 79.9334%-103 - C2 -4IKO Error ?
15 PsiBlast_PDB 79.9234%-102 - C2 -4LWQ - ? -
20 PsiBlast_PDB 79.7034%-101 - C2 -4HOY Error ?
23 PsiBlast_CBE 79.5834%-102 - C2 -4JWK 3.5 ?
37 PsiBlast_CBE 78.5632%-102 - C2 -3KK0 2.8 PTH_MYCS2
14 PsiBlast_PDB 76.9135% -95 - C2 -3NEA 3.0 PTH_FRATT
53 HHSearch 75.7433%-101 - C2 -3NEA 3.0 PTH_FRATT