@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0044: (2015-11-27 )
MNLFKTIGIIGGGQLGQMMAIAAIYMGHKVITLDPASDCSASRVSEVIVAPYDDVEALGQLAARCDVLTYEFENVDADGLDAVVSAGQLPQGTDLLRISQNRIFEKDFLANKAGVTVAPYKVVTSSLDLEGFDLTKTYVLKTATGGYDGHGQKVIRSAEDLPEAQQLANSAECVLEEFVDFDLEISVIVSGNGQDVTVFPVQENIHRNNILSKTIVPARISDQLADKAKKMAVQIAKELQLSGTLCVEMFVTADDIIVNEIAPRPHNSGHYSIEACDFSQFDTHILGVLGQPLPPIKLHAPAVMLNVLGQHVQQAIDYVAENPSAHLHIYGKLEAKHNRKMGHVTVFTEDADEVEEF

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_6(3V4S)
?
[Raw transfer]




ADP_A_3(3V4S)
?
[Raw transfer]




A12_A_3(4MAM)
?
[Raw transfer]




ADP_A_3(3R5H)
?
[Raw transfer]




ATP_B_12(4DLK)
?
[Raw transfer]




ATP_A_6(4DLK)
?
[Raw transfer]




ANP_A_2(4MA5)
?
[Raw transfer]




ADP_A_3(3QFF)
?
[Raw transfer]




ADP_B_4(3QFF)
?
[Raw transfer]




ADP_A_4(3ORQ)
?
[Raw transfer]




ADP_A_4(3ORQ)
?
[Raw transfer]




ADP_B_6(3R5H)
?
[Raw transfer]




AMP_A_2(4MA0)
?
[Raw transfer]




AMP_B_5(3AW8)
?
[Raw transfer]




AMP_A_3(3AW8)
?
[Raw transfer]




AMP_A_3(3AW8)
?
[Raw transfer]




ATP_A_7(4DLK)
?
[Raw transfer]




ATP_A_8(4DLK)
?
[Raw transfer]




1 PsiBlast_PDB 87.0550%-107 - C2 -4DLK 7.0 ?
4 PsiBlast_PDB 86.6650%-106 - C2 -3R5H 6.8 ?
3 PsiBlast_PDB 86.5850%-108 - C2 -3QFF 6.7 ?
23 PsiBlast_CBE 86.3850%-107 - C2 -3QFF 5.4 ?
2 PsiBlast_PDB 86.3350%-106 - C2 -3Q2O - ? -
5 PsiBlast_PDB 86.3150%-104 - C2 -3V4S 7.4 ?
24 PsiBlast_CBE 86.1550%-107 - C2 -3Q2O - ? -
21 PsiBlast_CBE 86.0050%-105 - C2 -4DLK 6.7 ?
25 PsiBlast_CBE 85.5550%-107 - C2 -3V4S 7.7 ?
22 PsiBlast_CBE 84.9750%-105 - C2 -3R5H 5.7 ?
84 HHSearch 84.9350% -98 * C2 *3Q2O - ? -
82 HHSearch 82.2448% -94 - C2 -3ORQ 5.4 ?
6 PsiBlast_PDB 80.3746% -96 - C2 -3ORQ 5.4 ?
88 HHSearch 78.2740% -97 - C2 -3AX6 - ? -
8 PsiBlast_PDB 78.1439% -93 - C2 -4E4T - ? -
26 PsiBlast_CBE 76.4839% -95 - C2 -4E4T - ? -
15 PsiBlast_PDB 75.2733% -88 - C2 -4MAM 7.5 ?
13 PsiBlast_PDB 74.4733% -90 - C2 -4MA0 5.4 ?
16 PsiBlast_PDB 74.4433% -88 - C2 -4M9U - ? -
14 PsiBlast_PDB 74.3033% -90 - C2 -4MA5 5.2 ?
83 HHSearch 73.3736% -89 - C2 -3AW8 4.4 ?
27 PsiBlast_CBE 71.0135% -89 - C2 -3AW8 5.5 ?
9 PsiBlast_PDB 68.7735% -86 - C2 -3AW8 4.4 ?