@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0053: (2015-11-28 )
MTEKTKAVETTDVALAIDTLVQNGLKALDEMRQLNQEQVDYIVAKASVAALDAHGELALHAVEETGRGVFEDKATKNLFACEHVVNNMRHTKTVGVIEEDDVTGLTLIAEPVGVVCGITPTTNPTSTAIFKSLISLKTRNPIIFAFHPSAQESSAHAARIVRDAAIAAGAPENCVQWIEQPSIDATNALMNHDGIATILATGGNAMVKAAYSCGKPALGVGAGNVPAYVEKSANIRQAAHDIVMSKSFDNGMVCASEQAVIIDKEIYKEFVEEFKSYHTYFVNKKEKALLEEFCFGAKANSKNCAGAKLNPNIVGKSAVWIAEQAGFTVPEGTNILAAECTEVSEKEPLTREKLSPVIAVLKAESTEDGVEKARQMVEFNGLGHSAAIHTKDADLAREFGTRIRAIRVIWNSPSTFGGIGDVYNAFLPSLTLGCGSYGRNSVGDNVSAINLLNIKKVGRRRNNMQWFKVPSKTYFERDSIQYLQKCRDVERVMIVTDHAMVELGFLDRIIEQLDLRRNKVVYQIFAEVEPDPDITTVMKGTDLMRTFKPDTIIALGGGSPMDAAKVMWLFYEQPEVDFHDLVQKFMDIRKRAFKFPELGKKTKFVAIPTTSGTGSEVTPFAVISDKANNRKYPIADYSLTPTVAIVDPALVMTVPGFIAADTGMDVLTHATEAYVSQMANDYTDGLALQAIKIVFDYLERSVKDADFEAREKMHNASTMAGMAFANAFLGISHSMAHKIGAQFHTVHGRTNAILLPYVIRYNGTRPAKTATWPKYNYYRADEKYQDIAKLLGLPAATPEEAVESYAKAVYDLGTRLGIKMNFRDQGIDEKEWKEKSRELAFLAYEDQCSPANPRLPMVDHMQEIIEDAYYGYEERPGRRK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_7(2BI4)
FUCO_ECOLI
[Raw transfer]




NAD_A_4(2BI4)
FUCO_ECOLI
[Raw transfer]




NAD_B_7(2BL4)
FUCO_ECOLI
[Raw transfer]




NAD_A_4(2BL4)
FUCO_ECOLI
[Raw transfer]




APR_A_7(1RRM)
FUCO_ECOLI
[Raw transfer]




APR_A_7(1RRM)
FUCO_ECOLI
[Raw transfer]




1 PsiBlast_PDB 88.3248% -72 - C2 -3MY7 - ? -
71 Fugue 87.5440% -69 - C2 -3K9D - ? -
21 PsiBlast_CBE 85.9841% -72 - C2 -3K9D - ? -
2 PsiBlast_PDB 85.9041% -71 - C2 -3K9D - ? -
22 PsiBlast_CBE 85.7341% -71 - C2 -3K9D - ? -
61 HHSearch 81.3949% -58 - C2 -3MY7 - ? -
65 HHSearch 79.0935% -71 - C1 -1RRM 6.3 FUCO_ECOLI
3 PsiBlast_PDB 77.5434% -80 - C1 -2BI4 7.7 FUCO_ECOLI
69 HHSearch 76.7536% -58 - C2 -3K9D - ? -
4 PsiBlast_PDB 76.5334% -77 - C1 -2BL4 7.3 FUCO_ECOLI
24 PsiBlast_CBE 76.4634% -77 - C1 -2BI4 7.6 FUCO_ECOLI
5 PsiBlast_PDB 76.0333% -70 - C1 -1RRM 6.3 FUCO_ECOLI
40 PsiBlast_CBE 74.6233% -81 - C1 -3BFJ - DHAT_KLEPN -
23 PsiBlast_CBE 74.4134% -76 - C1 -2BL4 7.7 FUCO_ECOLI
41 PsiBlast_CBE 73.8833% -80 - C1 -3BFJ - DHAT_KLEPN -
43 PsiBlast_CBE 73.7333% -77 - C1 -3BFJ - DHAT_KLEPN -
42 PsiBlast_CBE 73.2633% -81 - C1 -3BFJ - DHAT_KLEPN -
39 PsiBlast_CBE 72.6133% -80 - C1 -3BFJ - DHAT_KLEPN -
68 HHSearch 72.3233% -70 * C1 *3OX4 - ADH2_ZYMMO -
6 PsiBlast_PDB 71.5933% -79 - C1 -3BFJ - DHAT_KLEPN -