@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0054: (2015-11-28 )
MKAVVVNQASTGVEVVEHDLPKVGHGEALVKVEYCGVCHTDLHVAHGDFGQVPGRILGHEGIGIVEEIGEGVTSLRVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYSVDGGMSEYAVVTADYAVKVPEGLDPAQASSITCAGVTTYKAIKEAGAAPGQWIAVYGAGGLGNLAVQYAKKVFNAHVVAVDINADKLQLAKEVGADLTVNGKEIKDVAAYIQEKTGGCHGVVVTAVSKVAFNQAIDSVRAGGTVVAVGLPSEYMELSIVKTVLDGIRVVGSLVGTRKDLEEAFAFGAEGLVVPVVEKVPVDTAPQVFDEMERGLIQGRKVLDFTK

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_5(5C1K)
ADH1_YEAST
[Raw transfer]




ETX_B_10(1R37)
ADH_SULSO
[Raw transfer]




ETX_A_8(1R37)
ADH_SULSO
[Raw transfer]




NAD_B_9(5C1K)
ADH1_YEAST
[Raw transfer]




ETF_A_6(5C1K)
ADH1_YEAST
[Raw transfer]




ETF_B_10(5C1K)
ADH1_YEAST
[Raw transfer]




BU1_C_15(2XAA)
?
[Raw transfer]




CHAIN_P_5(4GKV)
ADHP_ECOLI
[Raw transfer]

-

EDO_B_13(4C4O)
?
[Raw transfer]




24 PsiBlast_CBE 95.6865%-110 - C1 -4GKV 2.9 ADHP_ECOLI
3 PsiBlast_PDB 95.2665%-112 - C1 -4GKV - ADHP_ECOLI -
23 PsiBlast_CBE 94.5465%-110 - C1 -4GKV - ADHP_ECOLI -
25 PsiBlast_CBE 92.6865%-110 - C1 -4GKV - ADHP_ECOLI -
1 PsiBlast_PDB 84.1460%-104 - C1 -4EEZ - ? -
41 PsiBlast_CBE 83.8944%-118 - C1 -3MEQ - ? -
29 PsiBlast_CBE 83.7255%-112 - C1 -3PII - ADH3_GEOSE -
5 PsiBlast_PDB 83.7255%-109 - C1 -3PII - ADH3_GEOSE -
4 PsiBlast_PDB 82.9255%-109 - C1 -1RJW - ADH3_GEOSE -
2 PsiBlast_PDB 82.8560%-106 - C1 -4EEX - ? -
40 PsiBlast_CBE 82.8044%-118 - C1 -3MEQ - ? -
21 PsiBlast_CBE 82.6960%-107 - C1 -4EEZ - ? -
38 PsiBlast_CBE 82.5947%-109 - C1 -1LLU - ? -
71 PsiBlast_CBE 82.4645%-112 - C1 -3S1L - ? -
34 PsiBlast_CBE 82.3347%-109 - C1 -1LLU - ? -
31 PsiBlast_CBE 82.2955%-109 - C1 -3PII - ADH3_GEOSE -
27 PsiBlast_CBE 82.1055%-109 - C1 -1RJW - ADH3_GEOSE -
33 PsiBlast_CBE 81.9747%-109 - C1 -1LLU - ? -
32 PsiBlast_CBE 81.9447%-109 - C1 -1LLU - ? -
72 PsiBlast_CBE 81.8045%-109 - C1 -3S1L - ? -
14 PsiBlast_PDB 65.4139% -94 - C1 -5C1K 11.9 ADH1_YEAST
73 PsiBlast_CBE 62.6439% -96 - C1 -5C1K 8.5 ADH1_YEAST
90 PsiBlast_CBE 59.8132% -94 - C1 -1R37 2.5 ADH_SULSO
89 PsiBlast_CBE 59.4332% -96 - C1 -1R37 3.2 ADH_SULSO
82 PsiBlast_CBE 50.8734% -96 - C1 -2XAA 2.1 ?
102 PsiBlast_CBE 44.0431% -97 - C1 -4C4O 2.1 ?