@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0100: (2015-11-28 )
MKTRNVLAISGNDIFSGGGLHADLATYVVNKLHGFVAVTCLTAMSDKGFEVIPIEASILKQQLESLKDVEFGSIKLGLLPNVETAQVVLEFVKSKQECPVVLDPVLVCKENHDLEVSQLREQLIAFFPYADVITPNLVEAQLLTGLSIENLDQMKIAAEKLYDMGAKHVVIKGGNRLNAEEATDLYYDGERFETYVFPVVDANNTGAGCTFASSIASQLAMGKNVEDAVKMSKGFVYQAIKASDKYGVVQHF

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_D_16(4C5N)
?
[Raw transfer]




ACP_B_8(4C5N)
?
[Raw transfer]




ACP_C_12(4C5N)
?
[Raw transfer]




ACP_A_6(4C5N)
?
[Raw transfer]




ADP_A_5(4C5K)
?
[Raw transfer]




ADP_D_17(4C5K)
?
[Raw transfer]




ACP_D_20(4C5M)
?
[Raw transfer]




ACP_B_10(4C5M)
?
[Raw transfer]




ACP_C_15(4C5M)
?
[Raw transfer]




ACP_A_5(4C5M)
?
[Raw transfer]




EDO_A_3(4YL5)
?
[Raw transfer]




UEG_A_5(4C5L)
?
[Raw transfer]




UEG_C_10(4C5L)
?
[Raw transfer]




UEG_D_11(4C5L)
?
[Raw transfer]




25 PsiBlast_CBE 94.7336% -99 - C1 -4C5N 6.8 ?
6 PsiBlast_PDB 94.4636% -97 - C1 -4C5N 7.4 ?
33 PsiBlast_CBE 94.3436% -97 - C1 -4C5K 5.8 ?
2 PsiBlast_PDB 94.3136% -99 - C1 -4C5J - ? -
38 PsiBlast_CBE 94.2936% -96 - C1 -4C5J - ? -
3 PsiBlast_PDB 94.0936%-100 - C1 -4C5K 6.6 ?
26 PsiBlast_CBE 93.9836% -98 - C1 -4C5N 6.8 ?
32 PsiBlast_CBE 93.9536% -94 - C1 -4C5L 2.5 ?
36 PsiBlast_CBE 93.9236% -96 - C1 -4C5J - ? -
28 PsiBlast_CBE 93.8636% -97 - C1 -4C5M 6.4 ?
35 PsiBlast_CBE 93.7836% -97 - C1 -4C5K - ? -
29 PsiBlast_CBE 93.6536% -96 - C1 -4C5M 6.3 ?
27 PsiBlast_CBE 93.6436% -98 - C1 -4C5N 6.8 ?
21 PsiBlast_CBE 93.6437% -95 - C1 -2I5B - PDXK_BACSU -
37 PsiBlast_CBE 93.6036% -96 - C1 -4C5J - ? -
5 PsiBlast_PDB 93.4436% -98 - C1 -4C5M 6.1 ?
30 PsiBlast_CBE 93.3436% -97 - C1 -4C5M 6.6 ?
34 PsiBlast_CBE 93.3236% -99 - C1 -4C5K - ? -
24 PsiBlast_CBE 93.3237% -94 - C1 -2I5B - PDXK_BACSU -
1 PsiBlast_PDB 93.2237% -96 - C1 -2I5B - PDXK_BACSU -
4 PsiBlast_PDB 92.8136% -98 - C1 -4C5L 2.7 ?
31 PsiBlast_CBE 92.4636% -93 - C1 -4C5L 3.4 ?
8 PsiBlast_PDB 83.0332%-112 - C1 -4YL5 2.0 ?