@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0116: (2015-11-28 )
MKKTGILNSHLAKLADDLGHTDRVCIGDLGLPVPNGIPKIDLSLTSGIPSFQEVLDIYLENILVEKVILAEEIKEANPDQLSRLLAKLDNSVSIEYVSHDHLKQMTQDVKAVIRTGENTPYSNIILQSGVII

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RP5_E_12(1OGE)
RBSD_BACSU
[Raw transfer]




RIP_C_9(1OGD)
RBSD_BACSU
[Raw transfer]




RIP_D_10(1OGD)
RBSD_BACSU
[Raw transfer]




RP5_D_11(1OGE)
RBSD_BACSU
[Raw transfer]




RP5_C_9(1OGE)
RBSD_BACSU
[Raw transfer]




RIP_A_7(1OGD)
RBSD_BACSU
[Raw transfer]




RIP_E_12(1OGD)
RBSD_BACSU
[Raw transfer]




RIP_A_7(1OGD)
RBSD_BACSU
[Raw transfer]




RIP_B_8(1OGD)
RBSD_BACSU
[Raw transfer]




RP5_B_8(1OGE)
RBSD_BACSU
[Raw transfer]




RIP_B_6(3P13)
RBSD_STAA8
[Raw transfer]




RIP_D_8(3P13)
RBSD_STAA8
[Raw transfer]




RIP_C_7(3P13)
RBSD_STAA8
[Raw transfer]




GOL_B_8(1OGF)
RBSD_BACSU
[Raw transfer]




GOL_D_8(3P12)
RBSD_STAA8
[Raw transfer]




GOL_D_11(1OGF)
RBSD_BACSU
[Raw transfer]




GOL_B_9(1OGF)
RBSD_BACSU
[Raw transfer]




GOL_D_10(1OGF)
RBSD_BACSU
[Raw transfer]




GOL_B_6(3P12)
RBSD_STAA8
[Raw transfer]




GOL_C_7(3P12)
RBSD_STAA8
[Raw transfer]




GOL_A_5(3P12)
RBSD_STAA8
[Raw transfer]




31 PsiBlast_CBE 99.0156%-115 - C1 -1OGD 3.2 RBSD_BACSU
2 PsiBlast_PDB 98.4156%-115 - C1 -1OGD - RBSD_BACSU -
26 PsiBlast_CBE 98.3956%-115 - C1 -1OGE 2.7 RBSD_BACSU
1 PsiBlast_PDB 98.3656%-115 - C1 -1OGC - RBSD_BACSU -
70 HHSearch 98.1056%-119 - C1 -1OGD 3.2 RBSD_BACSU
25 PsiBlast_CBE 98.0856%-118 - C1 -1OGE 2.9 RBSD_BACSU
23 PsiBlast_CBE 98.0156%-115 - C1 -1OGF 2.6 RBSD_BACSU
22 PsiBlast_CBE 98.0056%-110 - C1 -1OGF 2.7 RBSD_BACSU
3 PsiBlast_PDB 97.9656%-115 - C1 -1OGE - RBSD_BACSU -
4 PsiBlast_PDB 97.9156%-114 - C1 -1OGF - RBSD_BACSU -
60 Fugue 97.7155%-119 - C1 -1OGD 3.2 RBSD_BACSU
24 PsiBlast_CBE 97.6556%-117 - C1 -1OGF 2.6 RBSD_BACSU
33 PsiBlast_CBE 97.5656%-118 - C1 -1OGC - RBSD_BACSU -
30 PsiBlast_CBE 97.5556%-112 - C1 -1OGD 3.2 RBSD_BACSU
27 PsiBlast_CBE 97.3156%-110 - C1 -1OGE 2.8 RBSD_BACSU
29 PsiBlast_CBE 96.8556%-114 - C1 -1OGD 3.2 RBSD_BACSU
32 PsiBlast_CBE 96.8456%-115 - C1 -1OGD 3.3 RBSD_BACSU
28 PsiBlast_CBE 96.4156%-113 - C1 -1OGE 2.8 RBSD_BACSU
21 PsiBlast_CBE 96.4056%-114 - C1 -1OGF 4.1 RBSD_BACSU
72 HHSearch 92.6645%-120 - C1 -3E7N - RBSD_SALTY -
38 PsiBlast_CBE 86.6542%-116 - C1 -3P12 2.3 RBSD_STAA8
71 HHSearch 86.4042%-120 - C1 -3P12 2.8 RBSD_STAA8
36 PsiBlast_CBE 86.0942%-111 - C1 -3P13 3.3 RBSD_STAA8
35 PsiBlast_CBE 85.8942%-110 - C1 -3P13 3.3 RBSD_STAA8
37 PsiBlast_CBE 85.8742%-118 - C1 -3P12 2.4 RBSD_STAA8
39 PsiBlast_CBE 85.7342%-115 - C1 -3P12 2.7 RBSD_STAA8
34 PsiBlast_CBE 84.9242%-108 - C1 -3P13 3.4 RBSD_STAA8