@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0120: (2015-11-28 )
MSAILELKHISKHYPDGDELLSILDNLDLSVSAGEFVAILGPSGSGKSTLLSIAGLLLGADQGSLYVNHENVTDLSQRQRTQLRREALGFIFQSHQLLPYLTIQEQLQQEARFAKHYDKKTSLEEINKLLSDLGIEQCAHKYPNQLSGGQKQRAAIARAFINHPKVILADEPTASLDEERGRQVTELIRQEVKSHNTAAIMVTHDERVLDLVDTVYRLKDGKLVKENF

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




2 PsiBlast_PDB 92.5538% -91 - C1 -3TIF - Y796_METJA -
80 HHSearch 92.3638% -97 - C1 -3TIF - Y796_METJA -
1 PsiBlast_PDB 91.8138% -89 - C1 -1L2T - Y796_METJA -
22 PsiBlast_CBE 91.5138% -90 - C1 -3TIF 6.6 Y796_METJA
77 HHSearch 90.4439% -96 - C1 -2PCJ - LOLD_AQUAE -
21 PsiBlast_CBE 90.3538% -88 - C1 -1L2T 5.5 Y796_METJA
3 PsiBlast_PDB 88.7538% -86 - C1 -1F3O 5.7 Y796_METJA
11 PsiBlast_PDB 83.5432%-102 - C1 -3TUZ - METN_ECOLI -
25 PsiBlast_CBE 82.5833% -98 - C1 -4U02 - ? -
26 PsiBlast_CBE 82.4233% -95 - C1 -4U02 - ? -
4 PsiBlast_PDB 81.6240% -94 - C1 -2PCJ - LOLD_AQUAE -
84 Fugue 81.5532% -93 - C1 -1Z47 - ? -
8 PsiBlast_PDB 81.5533% -94 - C1 -4U02 - ? -
28 PsiBlast_CBE 81.3832% -97 - C1 -3TUZ - METN_ECOLI -
85 Fugue 81.2933% -96 - C1 -3TUZ - METN_ECOLI -
7 PsiBlast_PDB 81.1433% -95 - C1 -4U00 6.7 ?
5 PsiBlast_PDB 80.8740% -91 - C1 -2PCL - LOLD_AQUAE -
29 PsiBlast_CBE 80.6732%-100 - C1 -3TUZ - METN_ECOLI -
31 PsiBlast_CBE 80.5832% -97 - C1 -3TUI - METN_ECOLI -
10 PsiBlast_PDB 80.5632%-100 - C1 -3TUI - METN_ECOLI -
48 PsiBlast_CBE 71.8435% -93 - C1 -4YMU 4.8 ?
47 PsiBlast_CBE 70.4935% -92 - C1 -4YMU 5.4 ?
46 PsiBlast_CBE 69.5035% -92 - C1 -4YMV 4.1 ?
45 PsiBlast_CBE 69.2035% -94 - C1 -4YMV 5.2 ?
15 PsiBlast_PDB 62.2433% -96 - C1 -2OLK 5.0 ?
40 PsiBlast_CBE 61.9833% -92 - C1 -2OLK 4.5 ?
41 PsiBlast_CBE 61.0233% -92 - C1 -2OLK 5.2 ?
35 PsiBlast_CBE 60.7533% -96 - C1 -3C4J 3.3 ?
14 PsiBlast_PDB 60.7333% -96 - C1 -2OLJ 5.0 ?
42 PsiBlast_CBE 60.6133% -92 - C1 -2OLK 4.6 ?
34 PsiBlast_CBE 60.3433% -92 - C1 -3C41 4.6 ?
18 PsiBlast_PDB 60.2933% -92 - C1 -3C4J 5.4 ?
17 PsiBlast_PDB 59.8333% -94 - C1 -2Q0H 4.4 ?
36 PsiBlast_CBE 59.3133% -89 - C1 -2Q0H 5.2 ?
13 PsiBlast_PDB 58.1733% -89 - C1 -3C41 5.1 ?
43 PsiBlast_CBE 57.9433% -87 - C1 -2OLJ 4.3 ?