@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0156: (2015-11-28 )
MAGHEVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFQDFLDAGLKEVFEDVLPISNFTDTMDLEFVGYELKEPKYTLEEARIHDASYSAPIFVTFRLVNKETGEIKTQEVFFGDFPIMTEMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDAKDIAYTRIDRTRKIPFTTLVRALGFSGDDEIVDIFGDSELVRNTIEKDIHKNPSDSRTDEALKEIYERLRPGEPKTADSSRSLLVARFFDPRRYDLAAVGRYKINKKLNLKTRLLNQTIAENLVDGETGEILVEAGTVMTRDVIDSIAEHIDGDLNKFVYTPNDYAVVTEPVILQKFKVVAPTDPDRVVTIVGNSNPEDKVRALTPADILAEMSYFLNLAEGIGKVDDIDHLGNRRIRAVGELLANQFRIGLARMERNVRERMSVQDNEVLTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNPLSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSFGHLNKYGFIQTPYRKVDRSTGAVTNEIVWLTADEEDEFTVAQANSKLNEDGTFAEEIVMGRHQGNNQEFPSSIVDFVDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPKAPYVGTGMEYQAAHDSGAAVIAKHDGRVIFSDAEKVEVRREDGSLDVYHVQKFRRSNSGTAYNQRTLVKVGDLVEKGDFIADGPSMENGEMALGQNPVVAYMTWEGYNFEDAVIMSERLVKEDVYTSVHLEEFESETRDTKLGPEEITREIPNVGEDSLRDLDEMGIIRIGAEVKEGDILVGKVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGDGVVRDVKIFTRANGDELQSGVNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPSRMNIGQVMELHLGMAARNLGIHIATPVFDGASSEDLWETVQEAGMDSDAKTVLYDGRTGEPFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASNVLQEILTYKSDDVTGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRVLDEDDNEVELRDLDEGEDDDVMHVDDLEKARVKQEAEEKQAEQVSEVVQED

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_H_12(4WQS)
RPOB_THET8
[Raw transfer]
-
NACID_H_13(4G7Z)
RPOB_THET8
[Raw transfer]
-
NACID_H_8(4OIO)
RPOB_THET8
[Raw transfer]
-
NACID_H_8(4OIP)
RPOB_THET8
[Raw transfer]
-
NACID_H_8(4OIR)
RPOB_THET8
[Raw transfer]
-
NACID_H_8(4G7H)
RPOB_THET8
[Raw transfer]
-
NACID_H_8(4G7O)
RPOB_THET8
[Raw transfer]
-
NACID_H_8(4OIN)
RPOB_THET8
[Raw transfer]
-
CHAIN_H_8(4Q4Z)
RPOB_THET8
[Raw transfer]
-
CHAIN_I_7(4MQ9)
RPOB_THET8
[Raw transfer]
-
NACID_H_8(4OIQ)
RPOB_THET8
[Raw transfer]
-
NACID_X_4(2O5I)
RPOB_THET8
[Raw transfer]
-
NACID_G_1(2O5J)
RPOB_THET8
[Raw transfer]
-
NACID_G_1(2O5I)
RPOB_THET8
[Raw transfer]
-
NACID_R_15(4G7Z)
RPOB_THET8
[Raw transfer]
-
NACID_Y_15(4WQS)
RPOB_THET8
[Raw transfer]
-
NACID_U_21(3AOI)
RPOB_THET8
[Raw transfer]
-
NACID_X_4(2PPB)
RPOB_THET8
[Raw transfer]
-
NACID_X_4(2O5J)
RPOB_THET8
[Raw transfer]
-
NACID_G_1(2PPB)
RPOB_THET8
[Raw transfer]
-
NACID_G_7(4Q5S)
RPOB_THET8
[Raw transfer]
-
NACID_Q_17(3AOI)
RPOB_THET8
[Raw transfer]
-
NACID_Q_17(3AOH)
RPOB_THET8
[Raw transfer]
-
NACID_R_17(4G7O)
RPOB_THET8
[Raw transfer]
-
NACID_R_16(4G7H)
RPOB_THET8
[Raw transfer]
-
NACID_S_19(3AOI)
RPOB_THET8
[Raw transfer]
-
114 HHSearch 76.8753% -55 - C7 -2A6H - RPOB_THET8 -
105 Fugue 76.8451% -55 - C7 -3LU0 - RPOB_ECOLI -
34 PsiBlast_CBE 75.4657% -56 - C7 -4G7H 3.5 RPOB_THET8
104 Fugue 75.3952% -42 - C7 -1HQM - RPOB_THEAQ -
17 PsiBlast_PDB 75.3257% -56 - C7 -4G7H 3.4 RPOB_THET8
30 PsiBlast_CBE 75.1957% -53 - C7 -4MQ9 5.1 RPOB_THET8
26 PsiBlast_CBE 75.0757% -57 - C7 -4OIQ 3.4 RPOB_THET8
29 PsiBlast_CBE 74.9657% -58 - C7 -4OIN 3.9 RPOB_THET8
27 PsiBlast_CBE 74.9457% -55 - C7 -4OIP 3.8 RPOB_THET8
25 PsiBlast_CBE 74.7857% -55 - C7 -4OIR 3.7 RPOB_THET8
24 PsiBlast_CBE 74.7257% -57 - C7 -4Q4Z 2.7 RPOB_THET8
33 PsiBlast_CBE 74.6257% -53 - C7 -4G7O 3.6 RPOB_THET8
28 PsiBlast_CBE 74.6157% -54 - C7 -4OIO 3.1 RPOB_THET8
18 PsiBlast_PDB 74.5357% -54 - C7 -4G7O 3.9 RPOB_THET8
23 PsiBlast_CBE 74.2257% -54 - C7 -4Q5S 4.1 RPOB_THET8
19 PsiBlast_PDB 74.1757% -52 - C7 -4G7Z 3.5 RPOB_THET8
49 PsiBlast_CBE 73.9856% -54 - C7 -1YNN - RPOB_THEAQ -
32 PsiBlast_CBE 73.8657% -54 - C7 -4G7Z 3.6 RPOB_THET8
20 PsiBlast_PDB 73.7457% -54 - C7 -4GZY - RPOB_THET8 -
50 PsiBlast_CBE 73.6956% -56 - C7 -1YNJ - RPOB_THEAQ -
37 PsiBlast_CBE 73.5457% -54 - C7 -3AOI 2.3 RPOB_THET8
38 PsiBlast_CBE 73.2157% -55 - C7 -3AOI 2.4 RPOB_THET8
16 PsiBlast_PDB 72.8657% -54 - C7 -3AOI 2.4 RPOB_THET8
10 PsiBlast_PDB 72.4057% -51 - C7 -2O5I 3.8 RPOB_THET8
41 PsiBlast_CBE 72.3557% -51 - C7 -2O5I 4.1 RPOB_THET8
39 PsiBlast_CBE 72.3257% -49 - C7 -2PPB 3.6 RPOB_THET8
40 PsiBlast_CBE 72.2457% -51 - C7 -2O5J 4.2 RPOB_THET8
15 PsiBlast_PDB 72.2057% -54 - C7 -3AOH 2.5 RPOB_THET8
12 PsiBlast_PDB 72.0257% -50 - C7 -2PPB 4.8 RPOB_THET8
11 PsiBlast_PDB 71.7657% -52 - C7 -2O5J 3.4 RPOB_THET8
22 PsiBlast_CBE 71.6957% -52 - C7 -4WQS 3.8 RPOB_THET8
21 PsiBlast_CBE 71.3457% -52 - C7 -4WQS 3.9 RPOB_THET8