@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0167: (2015-11-29 )
MSKTIAINAGSSSLKWQLYEMPEEKVVAKGIIERIGLKDSISTVKFDDKKDEQILDIVDHTQAVKILLEDLTKHGIIKDFNEITGVGHRVVAGGEYFKESALVDDKVVEQVEELSALAPLHNPAAAAGIRAFREILPDITSVCVFDTAFHTTMQPHTYLYPIPQKYYTDYKVRKYGAHGTSHQYVAQEAAKQLGRPLEELKLITAHVGNGVSITANYHGQSIDTSMGFTPLAGPMMGTRSGDIDPAIIPYLVANDSELEDAAAVVNMLNKQSGLLGVSGTSSDMRDIEAGLQSKDPNAVLAYNVFIDRIKKFIGQYLAVLNGADAIIFTAGMGENAPLMRQDVIAGLSWFGIELDPEKNVFGYFGDITKPDSKVKVLVIPTDEELMIARDVERLKAK

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AQP_A_4(4FWN)
TDCD_SALTY
[Raw transfer]




ADP_F_6(1G99)
ACKA_METTE
[Raw transfer]




ATP_A_6(4FWM)
TDCD_SALTY
[Raw transfer]




B4P_A_2(2E1Z)
TDCD_SALTY
[Raw transfer]




B4P_A_2(2E20)
TDCD_SALTY
[Raw transfer]




ANP_E_5(1X3N)
TDCD_SALTY
[Raw transfer]




GTP_A_4(4FWQ)
TDCD_SALTY
[Raw transfer]




ADP_E_5(1G99)
ACKA_METTE
[Raw transfer]




ADP_E_5(1G99)
ACKA_METTE
[Raw transfer]




ADP_E_5(1G99)
ACKA_METTE
[Raw transfer]




AMP_B_8(4IJN)
ACKA_MYCS2
[Raw transfer]




ADP_C_3(1X3M)
TDCD_SALTY
[Raw transfer]




CTP_A_6(4FWS)
TDCD_SALTY
[Raw transfer]




GDP_A_4(4FWP)
TDCD_SALTY
[Raw transfer]




APC_A_3(4IZ9)
ACKA_MYCA1
[Raw transfer]




AMP_A_4(4IJN)
ACKA_MYCS2
[Raw transfer]




ADP_B_5(1TUY)
ACKA_METTE
[Raw transfer]




ADP_A_4(1TUY)
ACKA_METTE
[Raw transfer]




AMP_F_6(1TUU)
ACKA_METTE
[Raw transfer]




ADP_E_5(1TUU)
ACKA_METTE
[Raw transfer]




AMP_A_3(4FWK)
TDCD_SALTY
[Raw transfer]




5GP_A_5(4FWO)
TDCD_SALTY
[Raw transfer]




C5P_A_4(4FWR)
TDCD_SALTY
[Raw transfer]




PGE_B_6(3R9P)
ACKA_MYCPA
[Raw transfer]




PGE_A_5(3R9P)
ACKA_MYCPA
[Raw transfer]




PGE_A_5(3R9P)
ACKA_MYCPA
[Raw transfer]




EDO_A_2(4FWL)
TDCD_SALTY
[Raw transfer]




EDO_A_2(4FWP)
TDCD_SALTY
[Raw transfer]




ACY_B_7(1TUY)
ACKA_METTE
[Raw transfer]




37 HHSearch 96.5052% -99 - C8 -2IIR - ACKA_THEMA -
1 PsiBlast_PDB 96.2351% -95 - C8 -2IIR - ACKA_THEMA -
4 PsiBlast_PDB 95.7751% -95 - C8 -1TUY 4.6 ACKA_METTE
2 PsiBlast_PDB 95.6151% -92 - C8 -1G99 5.7 ACKA_METTE
55 Fugue 95.5751% -90 - C8 -1G99 5.7 ACKA_METTE
34 HHSearch 95.2651% -91 - C8 -1G99 5.7 ACKA_METTE
21 PsiBlast_CBE 95.2251% -98 - C8 -1G99 6.3 ACKA_METTE
3 PsiBlast_PDB 94.0651% -90 - C8 -1TUU 5.6 ACKA_METTE
23 PsiBlast_CBE 94.0351% -95 - C8 -1TUU 4.4 ACKA_METTE
22 PsiBlast_CBE 94.0251% -91 - C8 -1TUY 4.0 ACKA_METTE
38 HHSearch 89.8745% -95 * C8 *3R9P 1.9 ACKA_MYCPA
7 PsiBlast_PDB 88.6444% -90 - C8 -4IZ9 5.6 ACKA_MYCA1
5 PsiBlast_PDB 87.8744% -91 - C8 -3R9P 1.9 ACKA_MYCPA
9 PsiBlast_PDB 87.6042% -91 - C8 -4IJN 6.5 ACKA_MYCS2
6 PsiBlast_PDB 87.4744% -92 - C8 -3P4I - ACKA_MYCA1 -
12 PsiBlast_PDB 87.3840% -87 - C8 -4FWL 2.1 TDCD_SALTY
19 PsiBlast_PDB 87.2640% -87 - C8 -4FWK 5.3 TDCD_SALTY
24 PsiBlast_CBE 86.8144% -89 - C8 -3R9P 2.5 ACKA_MYCPA
31 PsiBlast_CBE 86.8040% -84 - C8 -4FWQ 6.3 TDCD_SALTY
17 PsiBlast_PDB 86.7440% -85 - C8 -2E1Z 9.4 TDCD_SALTY
32 PsiBlast_CBE 86.5140% -84 - C8 -4FWP 6.0 TDCD_SALTY
20 PsiBlast_PDB 86.4740% -87 - C8 -4FWN 7.0 TDCD_SALTY
15 PsiBlast_PDB 86.4140% -85 - C8 -1X3N 5.9 TDCD_SALTY
29 PsiBlast_CBE 86.2040% -85 - C8 -4FWS 5.7 TDCD_SALTY
18 PsiBlast_PDB 85.8240% -85 - C8 -2E20 9.5 TDCD_SALTY
14 PsiBlast_PDB 85.7540% -86 - C8 -1X3M 5.3 TDCD_SALTY
30 PsiBlast_CBE 85.6340% -84 - C8 -4FWR 3.8 TDCD_SALTY
25 PsiBlast_CBE 85.5542% -89 - C8 -4IJN 6.3 ACKA_MYCS2
33 PsiBlast_CBE 85.4640% -87 - C8 -4FWO 6.0 TDCD_SALTY
13 PsiBlast_PDB 85.0840% -84 - C8 -4FWM 6.0 TDCD_SALTY