@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0233: (2015-11-29 )
MLKKSHFLQIFTLCLALLTISGCQLTDTKKPGHTTIKVAAQSSTESSIMANIVTELIHHELGYNTTLISNLGSSTVTHQALLRGDADIAATRYTGTDITGTLGLKAVKDTKEASKIVKTEFQKRYNQTWYPTYGFSDTYAFMVTKEFARQNKITKISDLKKLSTTMKAGVDSSWMNREGDGYTDFAKTYGFEFSHIYPMQIGLVYDAVESNKMQSVLGYSTDGRISSYDLEILRDDKKFFPPYEASMVVNNSIIKKDPKLKKLLHRLDGKINLKTMQNLNYMVDDKLLEPSVVAKQFLEKNHYFRGDK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DCK_B_4(3PPO)
OPUCC_BACSU
[Raw transfer]



4CS_B_4(3PPR)
OPUCC_BACSU
[Raw transfer]



4CS_A_3(3PPR)
OPUCC_BACSU
[Raw transfer]



BET_A_3(3PPP)
OPUCC_BACSU
[Raw transfer]



DCK_A_3(3PPO)
OPUCC_BACSU
[Raw transfer]



BET_B_4(3PPP)
OPUCC_BACSU
[Raw transfer]



PGE_A_3(3O66)
?
[Raw transfer]



PGE_A_3(3O66)
?
[Raw transfer]
4 PsiBlast_PDB 96.6054% -83 - C3 -3PPQ - OPUCC_BACSU -
3 PsiBlast_PDB 96.5154% -81 - C3 -3PPP 2.8 OPUCC_BACSU
1 PsiBlast_PDB 96.3054% -80 - C3 -3PPN - OPUCC_BACSU -
2 PsiBlast_PDB 96.2554% -81 - C3 -3PPO 3.3 OPUCC_BACSU
5 PsiBlast_PDB 95.9454% -82 - C3 -3PPR 3.2 OPUCC_BACSU
21 PsiBlast_CBE 95.7254% -84 - C3 -3PPR 3.1 OPUCC_BACSU
24 PsiBlast_CBE 95.7054% -84 - C3 -3PPO 3.1 OPUCC_BACSU
23 PsiBlast_CBE 95.1254% -82 - C3 -3PPP 3.0 OPUCC_BACSU
22 PsiBlast_CBE 95.0654% -83 - C3 -3PPQ - OPUCC_BACSU -
38 HHSearch 94.5750% -86 - C3 -3O66 2.3 ?
6 PsiBlast_PDB 94.4552% -78 - C3 -3R6U - OPUBC_BACSU -
7 PsiBlast_PDB 93.9049% -88 - C3 -3O66 2.3 ?
39 HHSearch 92.4351% -75 - C3 -3R6U - OPUBC_BACSU -
10 PsiBlast_PDB 85.0331% -78 - C3 -1SW5 - ? -
27 PsiBlast_CBE 84.8431% -78 - C3 -1SW5 - ? -
35 HHSearch 84.3630% -79 - C3 -1SW5 - ? -
55 Fugue 83.6430% -77 - C3 -1SW5 - ? -
26 PsiBlast_CBE 83.6231% -79 - C3 -1SW5 - ? -
25 PsiBlast_CBE 83.5331% -79 - C3 -1SW5 - ? -
11 PsiBlast_PDB 82.3630% -75 - C3 -3MAM - ? -