@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0284: (2015-11-29 )
MYDTLIIGSGPGGMTAALYAARSNLKVGLIEQGAPGGQMNNTAEIENYPGYDHISGPELSMKMYEPLEKFEVEHIYGIVQRVENDGDVKRVITEDESYEAKTVILATGAKNSLLGVPGEEEYTSRGVSYCAVCDGAFFRDQDLLVVGGGDSAVEEAVFLTQFAKSVTIIHRRDQLRAQKVLQDRAFANEKIKFVWDSVVKEIKGNEIKVSGVTVENLKTGEISEMTFGGVFIYVGLKPHSSMVSELGITDETGWVLTDTNMKTSIPGLYAIGDVRQKDLRQIATAVGEGAIAGQGVYNYITEHF

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_B_6(4A5L)
?
[Raw transfer]



NDP_B_9(4CBQ)
?
[Raw transfer]



NAP_B_7(3F8R)
?
[Raw transfer]



NDP_B_6(4A65)
?
[Raw transfer]



NAP_D_11(3F8R)
?
[Raw transfer]



NDP_A_3(4CBQ)
?
[Raw transfer]



NAP_C_9(3F8R)
?
[Raw transfer]



NAP_B_6(2Q0L)
TRXB_HELPY
[Raw transfer]



NAP_B_6(2Q0K)
TRXB_HELPY
[Raw transfer]



NDP_A_3(4A5L)
?
[Raw transfer]



NDP_A_3(4A65)
?
[Raw transfer]



NAP_A_4(4CCQ)
?
[Raw transfer]



NDP_A_4(4UP3)
?
[Raw transfer]



ACY_B_8(3F8D)
?
[Raw transfer]



ACY_B_9(3F8P)
?
[Raw transfer]



FAD_D_13(3ITJ)
TRXB1_YEAST
[Raw transfer]



FAD_A_3(2Q7V)
?
[Raw transfer]



FAD_A_3(4GCM)
TRXB_STAAW
[Raw transfer]



FLC_A_5(2WHD)
?
[Raw transfer]



FLC_B_7(2WHD)
?
[Raw transfer]
1 PsiBlast_PDB 95.3352%-100 - C1 -4GCM 13.0 TRXB_STAAW
30 PsiBlast_CBE 89.1641%-107 - C1 -3F8D - ? -
29 PsiBlast_CBE 88.2441%-107 - C1 -3F8D - ? -
26 PsiBlast_CBE 87.8841%-105 - C1 -3F8P - ? -
6 PsiBlast_PDB 87.3141%-104 - C1 -3F8D - ? -
28 PsiBlast_CBE 87.1941%-105 - C1 -3F8P 3.7 ?
4 PsiBlast_PDB 87.1541%-105 - C1 -3F8P - ? -
25 PsiBlast_CBE 86.9741%-104 - C1 -3F8R 7.7 ?
27 PsiBlast_CBE 86.3541%-103 - C1 -3F8P - ? -
23 PsiBlast_CBE 86.2141%-107 - C1 -3F8R 7.7 ?
72 HHSearch 86.1640%-100 - C1 -2Q0L - TRXB_HELPY -
31 PsiBlast_CBE 85.7441%-103 - C1 -3F8D 3.9 ?
5 PsiBlast_PDB 85.1741%-106 - C1 -3F8R - ? -
24 PsiBlast_CBE 84.3741%-105 - C1 -3F8R 6.6 ?
8 PsiBlast_PDB 83.6840% -96 - C1 -2Q0L - TRXB_HELPY -
76 HHSearch 83.4045% -90 - C1 -2Q7V 13.1 ?
34 PsiBlast_CBE 81.7440% -98 - C1 -2Q0L 6.7 TRXB_HELPY
7 PsiBlast_PDB 80.8140% -99 - C1 -2Q0K - TRXB_HELPY -
71 HHSearch 80.1541%-100 - C1 -3F8D - ? -
21 PsiBlast_CBE 79.6246% -92 - C1 -2Q7V - ? -
35 PsiBlast_CBE 78.0440% -97 - C1 -2Q0K 7.2 TRXB_HELPY
53 PsiBlast_CBE 77.8139% -93 - C1 -2WHD 3.7 ?
54 PsiBlast_CBE 75.9739% -92 - C1 -2WHD 3.5 ?
46 PsiBlast_CBE 74.5138% -89 - C1 -4A5L 7.1 ?
45 PsiBlast_CBE 73.4238% -86 - C1 -4A65 6.8 ?
44 PsiBlast_CBE 73.0038% -84 - C1 -4CBQ 7.5 ?
14 PsiBlast_PDB 72.1538% -86 - C1 -4CBQ 9.1 ?
18 PsiBlast_PDB 70.8638% -85 - C1 -4UP3 9.2 ?
12 PsiBlast_PDB 69.5538% -85 - C1 -4A5L 8.5 ?
13 PsiBlast_PDB 67.6838% -85 - C1 -4A65 8.3 ?
15 PsiBlast_PDB 66.8338% -84 - C1 -4CCQ 7.7 ?
37 PsiBlast_CBE 61.3640% -79 - C1 -3ITJ 10.8 TRXB1_YEAST