@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0286: (2015-11-29 )
MTLQDQIIKELGVKPVINPSQEIRRSVEFLKDYLLKHSFLKTYVLGISGGQDSTLAGRLAQLAVEELRADTGENYQFIAIRLPYGIQADEEDAQKALDFIKPDIALTINIKEAVDGQVRALNAAGVEITDFNKGNIKARQRMISQYAVAGQYAGAVIGTDHAAENITGFFTKFGDGGADLLPLFRLNKSQGKQLLAELGADKALYEKIPTADLEENKPGIADEIALGVTYQEIDAYLEGKVVSDKSRGIIENWWYKGQHKRHLPITIFDDFWK

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADJ_B_19(1KQP)
NADE_BACSU
[Raw transfer]



APC_A_6(1IH8)
NADE_BACSU
[Raw transfer]



APC_A_5(2PZ8)
NADE_BACAN
[Raw transfer]



APC_B_6(2PZ8)
NADE_BACAN
[Raw transfer]



ATP_A_6(1EE1)
NADE_BACSU
[Raw transfer]



AMP_B_7(2PZA)
NADE_BACAN
[Raw transfer]



AMP_A_5(1WXI)
NADE_ECOLI
[Raw transfer]



AMP_A_8(2PZA)
NADE_BACAN
[Raw transfer]



AMP_A_4(1FYD)
NADE_BACSU
[Raw transfer]



AMP_A_5(1WXI)
NADE_ECOLI
[Raw transfer]



NAD_A_8(2NSY)
NADE_BACSU
[Raw transfer]



NAD_A_8(2NSY)
NADE_BACSU
[Raw transfer]



NAD_B_10(2NSY)
NADE_BACSU
[Raw transfer]



AMP_C_17(3FIU)
?
[Raw transfer]



DND_C_3(1IFX)
NADE_BACSU
[Raw transfer]



AMP_D_22(3FIU)
?
[Raw transfer]



AMP_A_7(3FIU)
?
[Raw transfer]



AMP_A_7(3FIU)
?
[Raw transfer]



AMP_B_12(3FIU)
?
[Raw transfer]



DND_A_4(1EE1)
NADE_BACSU
[Raw transfer]



DND_B_5(1EE1)
NADE_BACSU
[Raw transfer]



ATP_A_6(1NSY)
NADE_BACSU
[Raw transfer]



ATP_B_5(1NSY)
NADE_BACSU
[Raw transfer]



DND_D_4(1IFX)
NADE_BACSU
[Raw transfer]



NAD_B_2(1WXH)
NADE_ECOLI
[Raw transfer]
4 PsiBlast_PDB 98.8163% -84 - C6 -1WXH 6.8 NADE_ECOLI
3 PsiBlast_PDB 96.0063% -82 - C6 -1WXG - NADE_ECOLI -
1 PsiBlast_PDB 95.9963% -82 - C6 -1WXE - NADE_ECOLI -
5 PsiBlast_PDB 95.9863% -77 - C6 -1WXI 4.5 NADE_ECOLI
2 PsiBlast_PDB 95.2163% -83 - C6 -1WXF - NADE_ECOLI -
48 HHSearch 92.3563% -71 - C6 -1WXI 4.5 NADE_ECOLI
6 PsiBlast_PDB 92.2262% -76 - C6 -3HMQ - NADE_SALTY -
26 PsiBlast_CBE 88.7858% -66 - C6 -4Q16 - NADE_DEIRA -
24 PsiBlast_CBE 87.9158% -65 - C6 -4Q16 - NADE_DEIRA -
9 PsiBlast_PDB 87.8758% -67 - C6 -4Q16 - NADE_DEIRA -
21 PsiBlast_CBE 87.5759% -78 - C6 -2PZB - NADE_BACAN -
13 PsiBlast_PDB 86.6957% -61 - C6 -1FYD 4.3 NADE_BACSU
30 PsiBlast_CBE 86.3457% -70 - C6 -1IH8 - NADE_BACSU -
37 Fugue 86.2757% -59 - C6 -2NSY 7.1 NADE_BACSU
32 PsiBlast_CBE 86.2257% -73 - C6 -1EE1 5.8 NADE_BACSU
31 PsiBlast_CBE 86.1757% -75 - C6 -1IFX 6.3 NADE_BACSU
28 PsiBlast_CBE 85.8957% -59 - C6 -1NSY 3.7 NADE_BACSU
11 PsiBlast_PDB 85.8357% -56 - C6 -2NSY 7.1 NADE_BACSU
23 PsiBlast_CBE 85.8159% -62 - C6 -2PZ8 7.1 NADE_BACAN
14 PsiBlast_PDB 85.7257% -74 - C6 -1IFX 6.3 NADE_BACSU
15 PsiBlast_PDB 85.6257% -56 - C6 -1IH8 6.4 NADE_BACSU
22 PsiBlast_CBE 85.0659% -62 - C6 -2PZA 4.1 NADE_BACAN
12 PsiBlast_PDB 85.0657% -54 - C6 -1EE1 7.1 NADE_BACSU
10 PsiBlast_PDB 84.4757% -58 - C6 -1NSY 3.9 NADE_BACSU
29 PsiBlast_CBE 84.4457% -56 - C6 -1KQP 9.1 NADE_BACSU
27 PsiBlast_CBE 84.1557% -57 - C6 -2NSY 6.1 NADE_BACSU
7 PsiBlast_PDB 84.1459% -61 - C6 -2PZ8 7.2 NADE_BACAN
8 PsiBlast_PDB 83.3259% -59 - C6 -2PZA 4.4 NADE_BACAN
50 HHSearch 65.6438% -49 * C6 *3FIU 4.2 ?
33 PsiBlast_CBE 59.9037% -34 - C6 -3FIU 4.3 ?
35 PsiBlast_CBE 58.9237% -32 - C6 -3FIU 4.4 ?
19 PsiBlast_PDB 58.0137% -33 - C6 -3FIU 4.2 ?
34 PsiBlast_CBE 57.7837% -33 - C6 -3FIU 4.6 ?