@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0307: (2015-11-30 )
MIQIGKLFAGRYRILKSIGRGGMADVYLARDLILDNEEVAIKVLRTNYQTDQIAVARFQREARAMAELTHPNIVAIRDIGEEDGQQFLVMEYVDGFDLKKYIQDNAPLSNNEVVRIMNEVLSAMSLAHQKGIVHRDLKPQNILLTKKGTVKVTDFGIAVAFAETSLTQTNSMLGSVHYLSPEQARGSKATVQSDIYAMGIMLFEMLTGHIPYDGDSAVTIALQHFQKPLPSILAENKSVPQALENIVIKATAKKLTDRYKTTYEMGRDLSTALSSTRHREPKLVFNDTESTKTLPKVTSTVSSLTTEQLLRNQKQAKTTEKITPDSASNDKTKSKKKASHRLLGTIMKLFFALCVVGIIVFAYKILVSPTTIRVPDVSNKTVAQAKMTLENSGLKVGAIRNIESDSVSEGLVVKTDPAAGRSRREGAKVNLYIATPNKSFTLGNYKEHNYKDILKDLQGKGVKKSLIKVKRKINNDYTTGTILAQSLPEGTSFNPDGNKKLTLTVAVNDPMIMPDVTGMTVGEVIETLTDLGLDADNLVFYQMQNGVYQAVVTPPSSSKIASQDPYYGGEVGLRRGDKVKLYLLGSKTTNNSSSTPIDSSASSSTGTTTSDSVSSSTDASTSDSSSTSTSSSTLPSDSTTNTGTANNPLTQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_2(1O6Y)
PKNB_MYCTU
[Raw transfer]



AGS_A_2(3ORT)
?
[Raw transfer]



AGS_A_2(3ORO)
?
[Raw transfer]



AGS_A_2(3ORK)
?
[Raw transfer]



AGS_A_2(3ORP)
?
[Raw transfer]



AGS_A_2(3ORM)
?
[Raw transfer]



ADP_A_2(3F61)
PKNB_MYCTU
[Raw transfer]



MIX_G_7(2FUM)
PKNB_MYCTU
[Raw transfer]



MIX_E_5(2FUM)
PKNB_MYCTU
[Raw transfer]
22 PsiBlast_CBE 88.4245% -97 - C1 -4EQM - ? -
23 PsiBlast_CBE 87.6445% -98 - C1 -4EQM - ? -
21 PsiBlast_CBE 87.6345% -96 - C1 -4EQM - ? -
24 PsiBlast_CBE 84.0445% -94 - C1 -4EQM - ? -
25 PsiBlast_CBE 83.4145% -94 - C1 -4EQM - ? -
26 PsiBlast_CBE 82.4242% -91 - C1 -2FUM 5.0 PKNB_MYCTU
1 PsiBlast_PDB 81.9245% -93 - C1 -4EQM - ? -
8 PsiBlast_PDB 81.4542% -91 - C1 -1O6Y 5.5 PKNB_MYCTU
9 PsiBlast_PDB 80.4842% -87 - C1 -2FUM 4.5 PKNB_MYCTU
2 PsiBlast_PDB 80.3040% -80 - C1 -3ORK 4.9 ?
3 PsiBlast_PDB 79.1440% -79 - C1 -3ORO 7.6 ?
5 PsiBlast_PDB 78.3640% -76 - C1 -3ORT 7.5 ?
6 PsiBlast_PDB 78.3440% -80 - C1 -3F61 5.0 PKNB_MYCTU
4 PsiBlast_PDB 77.7540% -74 - C1 -3ORP 7.8 ?
7 PsiBlast_PDB 75.8740% -86 - C1 -3ORM 7.2 ?
123 HHSearch 65.2524% -78 - C1 -3CBL - -
10 PsiBlast_PDB 65.2239% -87 - C1 -4OW8 - PKNA_MYCTU -
119 HHSearch 63.7124% -73 - C1 -2Y7J - PHKG2_HUMAN -
118 HHSearch 63.2329% -72 - C1 -3FE3 - MARK3_HUMAN -
101 Fugue 59.9224% -87 - C1 -1BYG - CSK_HUMAN -