@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0339: (2015-11-30 )
MFKKILIANRGEIAVRIIRAAREMGISTVAIYSEADKESLHTILADEAICVGPAKSAESYLNVNAILSAAIVTGAEAVHPGFGFLSENSKFATMCEEMNLKFIGPSGEVMDKMGDKINARTEMIKADVPVIPGSDGQVTSVEEAVSIAEEIGYPLMLKASAGGGGKGIRKVKSADELKPAFESASQEALAAFGNGAMYIEKVIYPARHIEVQILGDSFGKIVHLGERDCSLQRNNQKVLEESPSVAIGNTLRQQIGEAAVRAAEAVSYENAGTIEFLLDENSGQFYFMEMNTRVQVEHPVTEFVTGVDIVKEQIRIAAGIPLSVSQNDIKLTGHAIECRINAENPQFNFAPCPGTINGLHLPAGGMGLRVDSAVYTGYTIPPYYDSMIAKVIVHGENRFDALMKMQRALYELEIDGIVTNTEFQMDLISDKKVLAGDYDTSFLMEDFLPRYYGNNQ

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(2VPQ)
?
[Raw transfer]




ADP_A_4(3RUP)
ACCC_ECOLI
[Raw transfer]




ANP_B_7(2VPQ)
?
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ADP_A_4(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_A_2(3RV4)
ACCC_ECOLI
[Raw transfer]




AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]




ANP_A_5(2J9G)
ACCC_ECOLI
[Raw transfer]




ADP_A_8(3OUZ)
?
[Raw transfer]




ADP_B_7(3G8C)
ACCC_ECOLI
[Raw transfer]




ADP_B_8(2J9G)
ACCC_ECOLI
[Raw transfer]




ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3G8C)
ACCC_ECOLI
[Raw transfer]




ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]




ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]




ADP_B_4(3G8D)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




JZL_B_4(3JZI)
ACCC_ECOLI
[Raw transfer]




GOL_A_7(3VA7)
?
[Raw transfer]




JZK_B_4(3JZF)
ACCC_ECOLI
[Raw transfer]




LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_B_9(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3RV3)
ACCC_ECOLI
[Raw transfer]




Y7Y_A_2(4RZQ)
ACCC_HAEIN
[Raw transfer]




123 HHSearch 88.7351% -90 - C1 -3OUZ 6.4 ?
21 PsiBlast_CBE 88.4158% -85 - C1 -2VPQ 6.3 ?
1 PsiBlast_PDB 87.9158% -84 - C1 -2VPQ 6.9 ?
35 PsiBlast_CBE 87.3352% -90 - C1 -2W6N - ACCC_ECOLI -
124 HHSearch 86.9858% -84 - C1 -2VPQ 6.9 ?
30 PsiBlast_CBE 86.8152% -90 - C1 -2W71 - ACCC_ECOLI -
36 PsiBlast_CBE 86.6252% -91 - C1 -2W6M - ACCC_ECOLI -
23 PsiBlast_CBE 86.4452% -86 - C1 -3JZI 8.1 ACCC_ECOLI
13 PsiBlast_PDB 86.3652% -88 - C1 -2V5A - ACCC_ECOLI -
33 PsiBlast_CBE 86.3352% -89 - C1 -2W6Q - ACCC_ECOLI -
40 PsiBlast_CBE 86.2152% -89 - C1 -2V58 - ACCC_ECOLI -
52 PsiBlast_CBE 86.1051% -88 - C1 -3RV4 8.1 ACCC_ECOLI
16 PsiBlast_PDB 86.0352% -90 - C1 -2W6O - ACCC_ECOLI -
18 PsiBlast_PDB 86.0052% -88 - C1 -2W6Q - ACCC_ECOLI -
29 PsiBlast_CBE 85.9752% -90 - C1 -2W71 - ACCC_ECOLI -
43 PsiBlast_CBE 85.8952% -87 - C1 -3G8C 5.9 ACCC_ECOLI
31 PsiBlast_CBE 85.8052% -90 - C1 -2W70 - ACCC_ECOLI -
10 PsiBlast_PDB 85.7752% -89 - C1 -2VR1 4.2 ACCC_ECOLI
3 PsiBlast_PDB 85.7752% -83 - C1 -2VQD 7.0 ACCC_PSEAE
22 PsiBlast_CBE 85.7152% -91 - C1 -2C00 - ACCC_PSEAE -
45 PsiBlast_CBE 85.7052% -88 - C1 -3RV3 7.8 ACCC_ECOLI
24 PsiBlast_CBE 85.6652% -87 - C1 -3JZF 8.3 ACCC_ECOLI
9 PsiBlast_PDB 85.6252% -91 - C1 -2J9G 4.8 ACCC_ECOLI
39 PsiBlast_CBE 85.5752% -90 - C1 -2V59 4.8 ACCC_ECOLI
42 PsiBlast_CBE 85.3452% -87 - C1 -3G8C 4.9 ACCC_ECOLI
48 PsiBlast_CBE 85.0651% -87 - C1 -1DV2 4.1 ACCC_ECOLI
46 PsiBlast_CBE 85.0552% -87 - C1 -3RUP 6.7 ACCC_ECOLI
50 PsiBlast_CBE 85.0151% -89 - C1 -3G8D 4.5 ACCC_ECOLI
44 PsiBlast_CBE 84.9352% -87 - C1 -3RV3 6.1 ACCC_ECOLI
6 PsiBlast_PDB 84.8652% -87 - C1 -3JZI 7.8 ACCC_ECOLI
49 PsiBlast_CBE 84.2051% -86 - C1 -1DV2 5.0 ACCC_ECOLI
41 PsiBlast_CBE 84.1952% -91 - C1 -2J9G 6.6 ACCC_ECOLI
47 PsiBlast_CBE 83.7852% -85 - C1 -3RUP 7.8 ACCC_ECOLI
2 PsiBlast_PDB 82.3553% -91 - C1 -4RZQ 2.9 ACCC_HAEIN
132 HHSearch 75.9042% -89 - C1 -3VA7 2.2 ?
145 Fugue 74.5840% -84 * C1 *3VA7 3.4 ?
99 PsiBlast_CBE 74.4643% -87 - C1 -3VA7 2.2 ?