@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0354: (2015-11-30 )
MSKQFAVDFIEASREEASAILEFLNTVTEETDFILHTVSNQLSLSEMETFIENTLMTKNCICLIAKLKNKVIGLITIISQSDIEIEHVGDLFIAVQKDYWGYGIGHILMEEAIEWASDNDITRRLELSVQGRNERAIHLYQKFGFEIDGLQTRGIKRENGEFLDIYRMSKLID

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACO_H_8(2I79)
?
[Raw transfer]




ACO_H_8(2I79)
?
[Raw transfer]




ACO_G_7(2I79)
?
[Raw transfer]




ACO_K_11(2I79)
?
[Raw transfer]




ACO_L_12(2I79)
?
[Raw transfer]




ACO_I_9(2I79)
?
[Raw transfer]




ACO_J_10(2I79)
?
[Raw transfer]




ACO_G_7(2I79)
?
[Raw transfer]




GOL_C_13(2VI7)
?
[Raw transfer]




25 PsiBlast_CBE 84.6146%-122 - C2 -2I79 11.7 ?
1 PsiBlast_PDB 84.4046%-124 - C2 -2I79 10.8 ?
24 PsiBlast_CBE 84.2946%-126 - C2 -2I79 11.0 ?
21 PsiBlast_CBE 84.0546%-124 - C2 -2I79 11.0 ?
23 PsiBlast_CBE 84.0046%-124 - C2 -2I79 8.6 ?
22 PsiBlast_CBE 83.2246%-119 - C2 -2I79 11.5 ?
58 HHSearch 83.1543%-126 - C2 -2I79 11.1 ?
59 HHSearch 68.3124%-137 - C2 -2GE3 - ? -
71 HHSearch 66.8320%-115 - C2 -3OWC - ATSE2_PSEAE -
6 PsiBlast_PDB 65.9124%-120 - C1 -1YR0 - ? -
73 HHSearch 65.7523%-124 * C2 *1YR0 - ? -
75 HHSearch 61.5321%-122 - C2 -2JLM - ? -
74 HHSearch 60.8317%-119 - C2 -3DR6 - MDDA_SALTY -
60 HHSearch 59.5315%-115 - C2 -3FBU - ? -
63 HHSearch 57.8124%-105 - C2 -2VI7 2.9 ?
67 HHSearch 57.6617%-109 - C2 -2Z10 - ? -
66 HHSearch 57.0118%-137 - C2 -2AE6 - ? -
69 HHSearch 56.7918%-113 - C2 -3WR7 - ? -
78 HHSearch 56.6521%-122 - C2 -1TIQ - PAIA_BACSU -
65 HHSearch 54.5516%-106 - C2 -3R9F - ? -