@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0357: (2015-11-30 )
MDNCIFCKIISGEIPSSKVYEDDEVLAFLDITQTTTGHTLLIPKKHVRNVLEMDEKTAQITFERLPKVARAVQAATKAKGMNIINNNEEIAGQTVFHAHVHLVPRFDESDGIKIHYTTHEPDFEALAKLAKEIRKEIQL

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UNL_B_6(3LB5)
?
[Raw transfer]




UNL_D_8(3LB5)
?
[Raw transfer]




UNL_A_5(3LB5)
?
[Raw transfer]




UNL_A_5(3LB5)
?
[Raw transfer]




ADN_A_2(3O1C)
HINT1_RABIT
[Raw transfer]




UNL_C_7(3LB5)
?
[Raw transfer]




EDO_A_6(3P0T)
?
[Raw transfer]




EDO_A_7(3P0T)
?
[Raw transfer]




1 PsiBlast_PDB 97.7266%-118 - C6 -3L7X - ? -
75 HHSearch 97.0566%-115 - C6 -3L7X - ? -
2 PsiBlast_PDB 85.4250%-113 - C6 -1Y23 - HIT_BACSU -
21 PsiBlast_CBE 84.8550%-108 - C6 -1Y23 - HIT_BACSU -
74 HHSearch 84.8149%-107 - C6 -1Y23 - HIT_BACSU -
23 PsiBlast_CBE 83.3950%-112 - C6 -1Y23 - HIT_BACSU -
24 PsiBlast_CBE 83.1350%-108 - C6 -1Y23 - HIT_BACSU -
73 HHSearch 82.0350%-107 - C6 -3IMI - ? -
22 PsiBlast_CBE 81.8550%-107 - C6 -1Y23 - HIT_BACSU -
3 PsiBlast_PDB 81.6248%-112 - C6 -3IMI - ? -
76 HHSearch 79.2741%-103 - C6 -3LB5 2.6 ?
6 PsiBlast_PDB 78.9038% -96 - C6 -2EO4 - ? -
25 PsiBlast_CBE 77.7843% -99 - C6 -3LB5 3.0 ?
4 PsiBlast_PDB 76.8243%-100 - C6 -3LB5 2.6 ?
54 PsiBlast_CBE 76.1336%-116 - C6 -3N1S - HINT_ECOLI -
72 HHSearch 75.7439% -91 - C6 -3KSV - ? -
49 PsiBlast_CBE 75.6236%-119 - C6 -3N1S - HINT_ECOLI -
5 PsiBlast_PDB 74.8440% -94 - C6 -3KSV - ? -
28 PsiBlast_CBE 74.5744%-113 - C6 -1XQU - ? -
26 PsiBlast_CBE 74.2943% -87 - C6 -3LB5 2.8 ?
27 PsiBlast_CBE 72.5743% -95 - C6 -3LB5 2.8 ?
79 HHSearch 72.2532% -87 - C6 -3P0T 2.5 ?
89 HHSearch 61.7032% -87 * C6 *3O1C 4.7 HINT1_RABIT