@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0359: (2015-11-30 )
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEADQELYRKKIGFIPETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPFLGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKEV

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_4(1G6H)
LIVG_METJA
[Raw transfer]




1 PsiBlast_PDB 96.6854%-137 - C1 -4RVC - ? -
52 HHSearch 71.7332%-130 - C1 -1VPL - ? -
49 HHSearch 65.8931%-118 * C1 *3TUI - METN_ECOLI -
33 Fugue 65.1329%-113 - C1 -3TUZ - METN_ECOLI -
25 PsiBlast_CBE 64.6832%-120 - C1 -3TUI - METN_ECOLI -
10 PsiBlast_PDB 64.6432%-130 - C1 -3TUZ - METN_ECOLI -
23 PsiBlast_CBE 64.5432%-120 - C1 -3TUZ - METN_ECOLI -
26 PsiBlast_CBE 63.8632%-121 - C1 -3TUI - METN_ECOLI -
61 HHSearch 63.3524%-124 - C1 -1B0U - HISP_SALTY -
9 PsiBlast_PDB 63.2632%-124 - C1 -3TUI - METN_ECOLI -
7 PsiBlast_PDB 62.7932%-127 - C1 -3DHW - METN_ECOLI -
21 PsiBlast_CBE 62.1532%-122 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 61.7532%-122 - C1 -3TUI - METN_ECOLI -
2 PsiBlast_PDB 61.7135%-126 - C1 -1VPL - ? -
15 PsiBlast_PDB 61.3829%-131 - C1 -4YMT - ? -
17 PsiBlast_PDB 61.2329%-129 - C1 -4YMV - ? -
55 HHSearch 60.9927%-120 - C1 -2OLJ - ? -
22 PsiBlast_CBE 60.8932%-120 - C1 -3TUZ - METN_ECOLI -
16 PsiBlast_PDB 60.7329%-129 - C1 -4YMU - ? -
29 PsiBlast_CBE 60.7031%-141 - C1 -1L2T - Y796_METJA -
34 Fugue 45.8230%-110 - C1 -1G6H 5.7 LIVG_METJA