@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0466: (2015-12-01 )
MTDTMILNDNHKIPTLGLGTWMINNDRVAQVVKDAIELGYRHINTAQAYNNEKGVGVGIKESGITRESLFVTTKIAAEHKNYESATKSIDQSLEALGLDCIDLMIIHSPQPWKEWRETDKHFDQGNL

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_3(1S1P)
AK1C3_HUMAN
[Raw transfer]




NDP_A_2(1US0)
ALDR_HUMAN
[Raw transfer]




NAP_A_3(4GIE)
PGFS_TRYCC
[Raw transfer]




NAP_A_2(3H7U)
AKRC9_ARATH
[Raw transfer]




NAP_A_4(3BUV)
AK1D1_HUMAN
[Raw transfer]




NDP_A_3(3D3F)
GR_BACSU
[Raw transfer]




NAP_A_3(1VP5)
?
[Raw transfer]




NDP_B_4(3D3F)
GR_BACSU
[Raw transfer]




GOL_B_8(3O0K)
?
[Raw transfer]




NDP_A_4(3WBW)
?
[Raw transfer]




GOL_A_6(3O0K)
?
[Raw transfer]




GOL_A_6(3O0K)
?
[Raw transfer]




GOL_D_12(3O0K)
?
[Raw transfer]




GOL_H_8(1MZR)
DKGA_ECOLI
[Raw transfer]




GOL_C_10(3O0K)
?
[Raw transfer]




NAP_C_3(1VBJ)
PGFS_TRYBB
[Raw transfer]




43 PsiBlast_CBE 84.8637% -77 - C7 -3UWE - AK1C3_HUMAN -
49 PsiBlast_CBE 84.8236% -77 - C7 -4WDW - AK1C3_HUMAN -
107 HHSearch 84.7237% -88 - C7 -1HW6 - DKGA_CORSC -
45 PsiBlast_CBE 84.6137% -75 - C7 -4XVD - AK1C3_HUMAN -
22 PsiBlast_CBE 84.5044% -67 - C7 -3O0K 2.1 ?
23 PsiBlast_CBE 84.0244% -71 - C7 -3O0K 3.2 ?
112 HHSearch 83.9245% -58 - C7 -3O0K 2.3 ?
1 PsiBlast_PDB 83.9144% -65 - C7 -3O0K 2.3 ?
98 PsiBlast_CBE 83.7237% -85 - C7 -4JQ4 - AK1C2_HUMAN -
50 PsiBlast_CBE 83.4336% -74 - C7 -4WDW - AK1C3_HUMAN -
102 PsiBlast_CBE 83.4137% -88 - C7 -4JQ2 - AK1C2_HUMAN -
82 PsiBlast_CBE 83.1237% -84 - C7 -3C3U - AK1C1_HUMAN -
55 PsiBlast_CBE 82.8736% -72 - C7 -1S1R - AK1C3_HUMAN -
47 PsiBlast_CBE 82.7737% -76 - C7 -4FAM - AK1C3_HUMAN -
64 PsiBlast_CBE 82.7037% -75 - C7 -1XF0 - AK1C3_HUMAN -
92 PsiBlast_CBE 82.6837% -85 - C7 -4JTR - AK1C2_HUMAN -
52 PsiBlast_CBE 82.5936% -71 - C7 -4WDT - AK1C3_HUMAN -
51 PsiBlast_CBE 82.5936% -76 - C7 -4WDU - AK1C3_HUMAN -
12 PsiBlast_PDB 82.4641% -62 - C7 -3F7J - GR_BACSU -
46 PsiBlast_CBE 82.3237% -76 - C7 -4WRH - AK1C3_HUMAN -
21 PsiBlast_CBE 81.6844% -64 - C7 -3O0K 2.2 ?
13 PsiBlast_PDB 81.4041% -60 - C7 -3D3F 3.4 GR_BACSU
36 PsiBlast_CBE 80.9341% -64 - C7 -3D3F 3.0 GR_BACSU
118 HHSearch 78.2338% -72 - C7 -1US0 2.9 ALDR_HUMAN
119 HHSearch 77.7335% -64 - C7 -3BUV 2.9 AK1D1_HUMAN
108 HHSearch 77.5433% -66 - C7 -3H7U 2.6 AKRC9_ARATH
109 HHSearch 77.4237% -68 - C7 -1S1P 3.0 AK1C3_HUMAN
114 HHSearch 77.0838% -57 - C7 -1VP5 3.3 ?
4 PsiBlast_PDB 75.9341% -54 - C7 -4GIE 3.0 PGFS_TRYCC
125 HHSearch 75.3237% -69 - C7 -1MZR 2.9 DKGA_ECOLI
110 HHSearch 74.2835% -56 - C7 -1VBJ 3.3 PGFS_TRYBB
117 HHSearch 74.0534% -55 - C7 -3WBW 3.1 ?