@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0468: (2015-12-01 )
MVKDRQIQKTKVAIYNAFISLLQENDYSKITVQDVIGLANVGRSTFYSHYESKEVLLKELCEDLFHHLFKQGRDVTFEEYLVHILKHFEQNQDSIATLLLSDDPYFLLRFRSELEHDVYPRLREEYITKVDIPEDFLKQFLLSSFIETLKWWLHQRQKMTVEDLLKYYLTMVER

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IMD_D_20(3KKC)
?
[Raw transfer]




IMD_C_16(3KKC)
?
[Raw transfer]




IMD_A_8(3KKC)
?
[Raw transfer]




IMD_A_8(3KKC)
?
[Raw transfer]




IMD_A_8(3KKC)
?
[Raw transfer]




IMD_B_12(3KKC)
?
[Raw transfer]




21 PsiBlast_CBE 97.3298%-165 - C1 -3KKC 3.8 ?
22 PsiBlast_CBE 97.2498%-170 - C1 -3KKC 3.5 ?
1 PsiBlast_PDB 96.3198%-160 - C1 -3KKC 3.6 ?
23 PsiBlast_CBE 94.8998%-162 - C1 -3KKC 3.7 ?
46 Fugue 90.6993%-149 - C1 -3KKC 3.6 ?
25 HHSearch 87.8094%-146 - C1 -3KKC 3.6 ?
47 Fugue 51.7919%-108 - C1 -2IU5 - DHAS_LACLA -
32 HHSearch 49.4617%-123 - C1 -1VI0 - FADR_BACSU -
26 HHSearch 48.3721%-118 - C1 -2IU5 - DHAS_LACLA -
51 Fugue 47.6512%-115 - C1 -2UXU - TTGR_PSEPT -
31 HHSearch 45.749%-112 - C1 -2QIB - ? -
49 Fugue 44.7912%-107 - C1 -2PBX - ? -
40 HHSearch 44.7715%-108 - C1 -3AQT - ? -
44 HHSearch 44.2214%-109 - C1 -3LSJ - ? -
12 PsiBlast_PDB 43.5833%-148 - C1 -2EH3 - ? -
38 HHSearch 43.4910%-108 - C1 -3COL - ? -
33 HHSearch 43.4513%-116 - C1 -3V6G - ? -
41 HHSearch 43.0411%-107 - C1 -3BJB - ? -
28 HHSearch 42.0313%-122 - C1 -3FRQ - ? -
20 PsiBlast_PDB 41.7024%-140 - C1 -1UI5 - ? -