@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0560: (2015-12-01 )
MLKEQKKSLFYTQGQEEVLTSLESSREGLSTTEAKNRLEMYGRNELEEGKKRSLIAKFFDQFKDLMIIILLVAAALSVITEGMHGLTDALIILAVVILNAAFGVYQEGQAEAAIEALKDMSSPIARVRRDGHTIEVDSKELVPGDLVMLEAGDVVPADLRLLEAASLKIEEAALTGESVPVEKDISQVVAEDAGIGDRVNMAYQNSNVTYGRGYGVVTNTGMYTEVGKIADMLANADESETPLKQSLVQLSKLLTYLIVIIAVITFLVGIFVRKEGWIEGLMTSVALAVAAIPEGLPAIVTIVLSMGTKTLAKRNSIVRKLPAVETLGSTEIIASDKTGTLTMNQMTVEKVYTNGVLQSSSEEISVDNNTLRIMNFSNDTKIDPSGKLIGDPTETALVQFGLDKNFDVREVLKNEPRVAELPFDSDRKLMSTIHKESDGRYFIAVKGAPDQLLKRVTKIEDNGLVRDITAEDKEAILNTNKELAKQALRVLMMAYKYETQIPTLETDIVESDLVFSGLVGMIDPERPEAAEAVRVAKEAGIRPIMITGDHQDTAEAIAKRLGIIDANDTEDHVFTGAELNELSDEEFQKVFKQYSVYARVSPEHKVRIVKAWQNDGKVVAMTGDGVNDAPSLKTADIGIGMGITGTEVSKGASDMVLADDNFATIIVAVEEGRKVFSNIQKSIQYLLSANMAEVFTIFFATLLGWDVLAPVHLLWINLVTDTLPAIALGVEPAEPGVMTHKPRGRQSNFFDGGVMGAIIYQGILQTILVLGVYGWALMYPEHAGYRMIHADALTMAFATLGLIQLVHAFNVKSVYQSIFTVGAFKNRTFNWSIPVAFILLMVTIVVPGFNKLFHVTHLSSTQWLTVVIGSLLMVVLTEIVKFIQRKLGQDEKAI

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_6(1T5S)
AT2A1_RABIT
[Raw transfer]




ACP_A_6(3N8G)
AT2A1_RABIT
[Raw transfer]




ACP_A_6(3TLM)
AT2A1_BOVIN
[Raw transfer]




ADP_A_8(1T5T)
AT2A1_RABIT
[Raw transfer]




ACP_A_5(4XOU)
AT2A1_RABIT
[Raw transfer]




TM1_A_5(3W5B)
AT2A1_RABIT
[Raw transfer]




ACP_A_3(2C88)
AT2A1_RABIT
[Raw transfer]




ACP_A_3(2BY4)
AT2A1_RABIT
[Raw transfer]




ACP_A_3(2C8K)
AT2A1_RABIT
[Raw transfer]




128_A_4(3AR7)
AT2A1_RABIT
[Raw transfer]




GOL_A_3(4UU0)
AT2A1_RABIT
[Raw transfer]




12D_A_5(3AR6)
AT2A1_RABIT
[Raw transfer]




TM1_A_4(3AR5)
AT2A1_RABIT
[Raw transfer]




ADP_A_5(3FPS)
AT2A1_RABIT
[Raw transfer]




ADP_A_4(2OA0)
AT2A1_RABIT
[Raw transfer]




ATP_A_7(3FPB)
AT2A1_RABIT
[Raw transfer]




ACP_A_4(3AR2)
?
[Raw transfer]




ADP_A_7(2ZBD)
?
[Raw transfer]




ACP_A_8(4UU1)
AT2A1_RABIT
[Raw transfer]




MF4_A_4(2O9J)
AT2A1_RABIT
[Raw transfer]




ATP_A_2(3AR4)
AT2A1_RABIT
[Raw transfer]




20 PsiBlast_PDB 92.3135% -84 - C1 -2EAU - AT2A1_RABIT -
60 PsiBlast_CBE 92.2135% -84 - C1 -2AGV - AT2A1_RABIT -
12 PsiBlast_PDB 92.0635% -82 - C1 -2C88 4.4 AT2A1_RABIT
32 PsiBlast_CBE 91.9735% -82 - C1 -3NAM - ? -
10 PsiBlast_PDB 91.9635% -84 - C1 -2AGV - AT2A1_RABIT -
13 PsiBlast_PDB 91.9535% -84 - C1 -2C8K 3.8 AT2A1_RABIT
33 PsiBlast_CBE 91.5135% -82 - C1 -3NAL - ? -
26 PsiBlast_CBE 91.4935% -83 - C1 -4J2T - AT2A1_RABIT -
17 PsiBlast_PDB 91.3035% -82 - C1 -2OA0 4.2 AT2A1_RABIT
22 PsiBlast_CBE 91.2635% -84 - C1 -4YCL - AT2A1_RABIT -
39 PsiBlast_CBE 91.2335% -78 - C1 -3FGO - ? -
102 Fugue 91.1738% -81 - C1 -1SU4 - AT2A1_RABIT -
56 PsiBlast_CBE 91.1735% -84 - C1 -2EAT - AT2A1_RABIT -
65 PsiBlast_CBE 91.1135% -84 - C1 -1IWO - AT2A1_RABIT -
8 PsiBlast_PDB 91.0735% -78 - C1 -1WPG - AT2A1_RABIT -
67 PsiBlast_CBE 91.0435% -97 - C1 -4NAB - AT2A1_RABIT -
3 PsiBlast_PDB 91.0435% -84 - C1 -1IWO - AT2A1_RABIT -
31 PsiBlast_CBE 90.9535% -83 - C1 -3NAN - ? -
55 PsiBlast_CBE 90.8835% -81 - C1 -2YFY - ? -
37 PsiBlast_CBE 90.6635% -83 - C1 -3FPS 4.5 AT2A1_RABIT
16 PsiBlast_PDB 89.8335% -78 - C1 -2O9J 2.8 AT2A1_RABIT
66 PsiBlast_CBE 89.5935% -86 - C1 -3W5B 5.7 AT2A1_RABIT
11 PsiBlast_PDB 88.3935% -82 - C1 -2BY4 4.0 AT2A1_RABIT
38 PsiBlast_CBE 88.2235% -78 - C1 -3FPB 3.5 AT2A1_RABIT
6 PsiBlast_PDB 88.0835% -76 - C1 -1T5T 6.8 AT2A1_RABIT
5 PsiBlast_PDB 87.4135% -77 - C1 -1T5S 7.2 AT2A1_RABIT
34 PsiBlast_CBE 87.3835% -76 - C1 -3N8G 6.8 AT2A1_RABIT
23 PsiBlast_CBE 87.3435% -77 - C1 -4XOU 7.2 AT2A1_RABIT
68 PsiBlast_CBE 86.3535% -77 - C1 -3TLM 6.7 AT2A1_BOVIN
113 HHSearch 62.8538% -21 * C1 *3AR4 1.6 AT2A1_RABIT
46 PsiBlast_CBE 60.8435% -18 - C1 -3AR5 2.0 AT2A1_RABIT
44 PsiBlast_CBE 60.4735% -17 - C1 -3AR7 1.3 AT2A1_RABIT
49 PsiBlast_CBE 60.3635% -24 - C1 -3AR2 3.7 ?
54 PsiBlast_CBE 60.0935% -23 - C1 -2ZBD 2.6 ?
45 PsiBlast_CBE 59.9135% -17 - C1 -3AR6 3.0 AT2A1_RABIT
25 PsiBlast_CBE 59.8135% -18 - C1 -4UU0 2.3 AT2A1_RABIT
24 PsiBlast_CBE 58.9735% -19 - C1 -4UU1 2.2 AT2A1_RABIT