@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0569: (2015-12-01 )
MSKVAIVTGAGQGIGFAIAKRLHADGFKIGVLDYNEETAQAAVDKLSPEDAVAVVADVSKRDQVFDAFQKVVDTFGDLNVVVNNAGVAPTTPLDTITEEQFEKAFAINVGGTIWGSQAAQKHFRELGHGGKIINATSQAGCEGNPNLTVYGGTKFAVRGITQTLAKDLASEGITVNAYAPGIVKTPMMFDIAHEVGKNAGKDDEWGMEQFAKDITLKRLSEPEDVANAVGFLAGDDSNYITGQTIVVDGGMVFH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_3(3WYE)
?
[Raw transfer]



NAD_B_4(3WYE)
?
[Raw transfer]



NAD_A_3(3WYE)
?
[Raw transfer]



NAD_A_5(2CFC)
HCDR_XANP2
[Raw transfer]
25 PsiBlast_CBE 93.8658% -79 - C1 -1GEG - BUDC_KLEPN -
27 PsiBlast_CBE 93.1458% -76 - C1 -1GEG - BUDC_KLEPN -
26 PsiBlast_CBE 92.7758% -79 - C1 -1GEG - BUDC_KLEPN -
22 PsiBlast_CBE 92.6358% -76 - C1 -1GEG - BUDC_KLEPN -
1 PsiBlast_PDB 92.2658% -77 - C1 -1GEG - BUDC_KLEPN -
23 PsiBlast_CBE 92.0658% -77 - C1 -1GEG - BUDC_KLEPN -
24 PsiBlast_CBE 90.9758% -76 - C1 -1GEG - BUDC_KLEPN -
21 PsiBlast_CBE 90.0958% -76 - C1 -1GEG - BUDC_KLEPN -
2 PsiBlast_PDB 85.1451% -78 - C1 -3WYE 11.5 ?
28 PsiBlast_CBE 84.3451% -77 - C1 -3WYE 11.4 ?
117 HHSearch 83.6252% -77 - C1 -3WYE 11.5 ?
107 HHSearch 78.6938% -73 - C1 -3WDS - ? -
3 PsiBlast_PDB 78.1944% -73 - C1 -3WTC - ? -
105 HHSearch 75.9537% -77 - C1 -2CFC 7.3 HCDR_XANP2
44 PsiBlast_CBE 74.8839% -70 - C1 -3AK4 - ? -
9 PsiBlast_PDB 74.7739% -69 - C1 -3WDS - ? -
35 PsiBlast_CBE 74.7546% -71 - C1 -3A28 - BUDC_CORGT -
45 PsiBlast_CBE 74.6939% -68 - C1 -3AK4 - ? -
33 PsiBlast_CBE 74.2746% -70 - C1 -3A28 - BUDC_CORGT -
43 PsiBlast_CBE 74.2639% -69 - C1 -3AK4 - ? -