@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0684: (2015-12-02 )
MIKITFPDGAIREFESGITTFEIAQSISNSLAKKALAGKFNGQLIDTTRAIEEDGSIEIVTPDHEDALGVLRHSAAHLFAQAAKRLFPDLCLGVGPAIQDGFYYDTDNKSGQISNDDLPRVEEEMKKIVKENHPCIREEISKEEALELFKDDPYKVELISEHAEDGLTVYRQGEFVDLCRGPHVPSTGRIQVFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKRREEAKERDHRKLGKELDLFMVNPEVGQGLPFWLPNGATIRRELERYIVDKEIASGYQHVYTPPMASVEFYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAELGMMHRYEKSGALTGLQRVREMTLNDAHIFVTPEQIKDEFLKALNLIAEIYEDFNLTDYRFRLSYRDPEDKHKYYDNDEMWENAQAMLKEAMDDFGLDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPIMIHRGGISTMERFTAILIETYKGAFPTWLAPQQVSVIPISNEAHIDYAWEVARVLKDRGIRAEVDDRNEKMQYKIRAAQTQKIPYQLIVGDKEMEEKAVNVRRYGSKATETKSIEEFVESILADIARKSRPDEVK

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

409_B_6(4HWO)
SYT_ECOLI
[Raw transfer]




409_A_4(4HWO)
SYT_ECOLI
[Raw transfer]




SSA_A_5(1FYF)
SYT_ECOLI
[Raw transfer]




TSB_A_3(3UH0)
SYTM_YEAST
[Raw transfer]




TSB_A_3(3UH0)
SYTM_YEAST
[Raw transfer]




SSA_B_6(1FYF)
SYT_ECOLI
[Raw transfer]




1B2_A_4(4HWR)
SYT_ECOLI
[Raw transfer]




1B2_B_6(4HWR)
SYT_ECOLI
[Raw transfer]




X16_B_6(4HWP)
SYT_ECOLI
[Raw transfer]




X16_A_4(4HWP)
SYT_ECOLI
[Raw transfer]




1B3_B_6(4HWS)
SYT_ECOLI
[Raw transfer]




1B3_A_4(4HWS)
SYT_ECOLI
[Raw transfer]




AMP_A_4(1QF6)
SYT_ECOLI
[Raw transfer]




THR_B_5(1EVK)
SYT_ECOLI
[Raw transfer]




2CR_B_9(4P3O)
SYT_ECOLI
[Raw transfer]




2CR_B_8(4P3P)
SYT_ECOLI
[Raw transfer]




2CR_A_4(4P3O)
SYT_ECOLI
[Raw transfer]




2CR_A_4(4P3P)
SYT_ECOLI
[Raw transfer]




1 PsiBlast_PDB 92.5663% -89 - C3 -1NYQ - SYT_STAAW -
2 PsiBlast_PDB 92.2963% -86 - C3 -1NYR - SYT_STAAW -
76 HHSearch 91.9964% -84 - C3 -1NYR - SYT_STAAW -
22 PsiBlast_CBE 90.1263% -87 - C3 -1NYQ - SYT_STAAW -
21 PsiBlast_CBE 89.6063% -83 - C3 -1NYR - SYT_STAAW -
3 PsiBlast_PDB 83.0641% -84 - C2 -1QF6 - SYT_ECOLI -
75 HHSearch 82.4841% -81 - C3 -1QF6 4.6 SYT_ECOLI
15 PsiBlast_PDB 66.1639% -83 - C3 -4P3N - SYTC_HUMAN -
43 PsiBlast_CBE 65.4239% -89 - C3 -4P3N - SYTC_HUMAN -
44 PsiBlast_CBE 65.0939% -85 - C3 -4P3N - SYTC_HUMAN -
14 PsiBlast_PDB 65.0940% -89 - C3 -4HWT - SYTC_HUMAN -
42 PsiBlast_CBE 65.0639% -87 - C3 -4P3N - SYTC_HUMAN -
40 PsiBlast_CBE 64.5940% -82 - C3 -1EVK 3.2 SYT_ECOLI
41 PsiBlast_CBE 64.3940% -88 - C3 -4HWT - SYTC_HUMAN -
6 PsiBlast_PDB 64.3340% -84 - C3 -4HWR 5.2 SYT_ECOLI
12 PsiBlast_PDB 64.3040% -82 - C3 -1FYF 5.9 SYT_ECOLI
25 PsiBlast_CBE 64.2440% -79 - C3 -4HWP 5.9 SYT_ECOLI
39 PsiBlast_CBE 64.2240% -78 - C3 -1EVL - SYT_ECOLI -
23 PsiBlast_CBE 64.1840% -82 - C3 -4HWS 5.3 SYT_ECOLI
26 PsiBlast_CBE 64.1340% -79 - C3 -4HWO 6.6 SYT_ECOLI
36 PsiBlast_CBE 63.8540% -80 - C3 -1FYF 6.4 SYT_ECOLI
5 PsiBlast_PDB 63.8340% -79 - C3 -4HWP 4.6 SYT_ECOLI
8 PsiBlast_PDB 63.7540% -79 - C3 -4P3O 8.5 SYT_ECOLI
7 PsiBlast_PDB 63.7140% -81 - C3 -4HWS 4.7 SYT_ECOLI
9 PsiBlast_PDB 63.7040% -78 - C3 -4P3P 9.0 SYT_ECOLI
24 PsiBlast_CBE 63.4840% -80 - C3 -4HWR 5.2 SYT_ECOLI
4 PsiBlast_PDB 63.4240% -79 - C3 -4HWO 6.6 SYT_ECOLI
28 PsiBlast_CBE 63.4040% -75 - C3 -4P3O 8.5 SYT_ECOLI
27 PsiBlast_CBE 62.9640% -78 - C3 -4P3P 8.8 SYT_ECOLI
78 HHSearch 61.7136% -75 - C3 -3UH0 6.5 SYTM_YEAST
18 PsiBlast_PDB 60.6635% -76 - C3 -3UH0 6.5 SYTM_YEAST