@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0749: (2015-12-02 )
MGLFDRLFGHKKKDKEPEIEASESVVLEDEDSVIDKEEGSNFSKESTLNRTSEVPVAEDDSFLELERDTALSESHQPVTSEIHPLESEDTDEIPVKEDDSFLELEDRAKTKVADTSEVENVVPDSTTLSDNVSAKSEASFSDKEQLSDSQASDQFSETPLQEEMSSGKTEVQTESEDTSAADAFLADYYAKRKAIEKEISSNSLSTDESEFSEAQEVLSQSQADTIKAESQEEKYNRSLKKTRTGFSARLNAFLSNFRRVDEEFFEELEEMLILSDVGVNVATQLTEDLRYEAKLENAKKSEDLKRVIVEKLVEIYEKDGIYNEAINFQEGLTVMLFVGVNGVGKTTSIGKLAHQYKSQGKKVMLVAADTFRAGAVAQLVEWGRRVDVPVVTGEEKADPASVVFDGMEKAVAQGVDVLLIDTAGRLQNKENLMAELEKIGRIIKRVVPDAPHETLLALDASTGQNALSQAKEFSKITPLTGLILTKIDGTAKGGVVLAIRQELDIPVKFIGFGEKIDDIGEFNSEDFMRGLLEGIL

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_6(2J7P)
FTSY_THEAQ
[Raw transfer]




GDP_B_17(3DM5)
SRP54_PYRFU
[Raw transfer]




GCP_D_17(1OKK)
FTSY_THEAQ
[Raw transfer]




GDP_B_11(4C7O)
FTSY_ECOLI
[Raw transfer]




GCP_B_6(1RJ9)
SRP54_THEAQ
[Raw transfer]




GNP_A_12(2J7P)
SRP54_THEAQ
[Raw transfer]




GNP_B_20(2J7P)
SRP54_THEAQ
[Raw transfer]




GNP_B_5(1JPN)
SRP54_THEAQ
[Raw transfer]




GDP_A_8(4C7O)
SRP54_ECOLI
[Raw transfer]




GNP_B_2(1JPJ)
SRP54_THEAQ
[Raw transfer]




GNP_B_20(2J7P)
FTSY_THEAQ
[Raw transfer]




GNP_A_6(1JPN)
SRP54_THEAQ
[Raw transfer]




GCP_A_3(1OKK)
FTSY_THEAQ
[Raw transfer]




GDP_B_17(3DM5)
SRP54_PYRFU
[Raw transfer]




GDP_C_14(4C7O)
SRP54_ECOLI
[Raw transfer]




GDP_A_6(1O87)
SRP54_THEAQ
[Raw transfer]




GCP_B_6(1RJ9)
FTSY_THEAQ
[Raw transfer]




GOL_B_14(3DMD)
?
[Raw transfer]




GDP_A_16(3DM5)
SRP54_PYRFU
[Raw transfer]




GNP_A_12(2J7P)
FTSY_THEAQ
[Raw transfer]




GOL_C_16(3DMD)
?
[Raw transfer]




GNP_K_11(2Q9C)
FTSY_THEAQ
[Raw transfer]




GCP_B_6(1RJ9)
FTSY_THEAQ
[Raw transfer]




GOL_A_15(3DMD)
?
[Raw transfer]




GNP_T_20(2Q9B)
FTSY_THEAQ
[Raw transfer]




GDP_A_8(4C7O)
FTSY_ECOLI
[Raw transfer]




GDP_B_2(2NG1)
SRP54_THEAQ
[Raw transfer]




GDP_B_12(1O87)
SRP54_THEAQ
[Raw transfer]




GDP_D_2(2IYL)
FTSY_THEAQ
[Raw transfer]




GDP_C_14(4C7O)
FTSY_ECOLI
[Raw transfer]




GDP_A_7(1NG1)
SRP54_THEAQ
[Raw transfer]




GDP_C_2(3E70)
?
[Raw transfer]




GDP_C_2(3E70)
?
[Raw transfer]




CIT_B_4(1VMA)
?
[Raw transfer]




GCP_D_17(1OKK)
SRP54_THEAQ
[Raw transfer]




EDO_B_13(3NG1)
SRP54_THEAQ
[Raw transfer]




EDO_A_2(2YHS)
FTSY_ECOLI
[Raw transfer]




EDO_B_14(3NG1)
SRP54_THEAQ
[Raw transfer]




EDO_A_12(3NG1)
SRP54_THEAQ
[Raw transfer]




GDP_D_18(4C7O)
FTSY_ECOLI
[Raw transfer]




ACY_A_9(1JPN)
SRP54_THEAQ
[Raw transfer]




3 PsiBlast_PDB 95.4247%-114 - C5 -2YHS - FTSY_ECOLI -
1 PsiBlast_PDB 94.6445%-110 - C5 -1ZU4 - FTSY_MYCMS -
4 PsiBlast_PDB 94.4747%-106 - C5 -2QY9 - FTSY_ECOLI -
6 PsiBlast_PDB 94.0647%-108 - C5 -1FTS - FTSY_ECOLI -
2 PsiBlast_PDB 93.6145%-108 - C5 -1ZU5 - FTSY_MYCMS -
104 HHSearch 93.3048% -98 - C5 -1VMA - ? -
99 HHSearch 93.2646%-101 - C5 -2YHS 2.5 FTSY_ECOLI
23 PsiBlast_CBE 92.9448%-100 - C5 -1VMA 3.8 ?
7 PsiBlast_PDB 92.7447%-109 - C5 -3ZN8 - FTSY_ECOLI -
112 HHSearch 92.3250%-109 - C5 -1ZU4 - FTSY_MYCMS -
22 PsiBlast_CBE 92.0948%-110 - C5 -4C7O 3.2 FTSY_ECOLI
9 PsiBlast_PDB 91.9748% -99 - C5 -1VMA - ? -
8 PsiBlast_PDB 91.4348%-105 - C5 -4C7O 6.9 FTSY_ECOLI
21 PsiBlast_CBE 90.4547%-110 - C5 -2XXA - FTSY_ECOLI -
5 PsiBlast_PDB 90.3147%-108 - C5 -2XXA - FTSY_ECOLI -
100 HHSearch 90.2639%-109 - C5 -3B9Q - CFTSY_ARATH -
98 HHSearch 87.9239%-102 - C5 -2OG2 - CFTSY_ARATH -
17 PsiBlast_PDB 87.3945%-107 - C5 -1OKK 9.2 FTSY_THEAQ
19 PsiBlast_PDB 86.9845%-104 - C5 -2J7P 2.6 FTSY_THEAQ
29 PsiBlast_CBE 86.9145%-103 - C5 -2J7P 2.7 FTSY_THEAQ
113 HHSearch 85.9644% -99 - C5 -1RJ9 2.5 FTSY_THEAQ
30 PsiBlast_CBE 85.5245%-100 - C5 -1RJ9 2.5 FTSY_THEAQ
16 PsiBlast_PDB 85.0445%-111 - C5 -2IYL 7.2 FTSY_THEAQ
14 PsiBlast_PDB 84.5645% -95 - C5 -2Q9C 6.3 FTSY_THEAQ
13 PsiBlast_PDB 84.4945% -96 - C5 -2Q9B 5.9 FTSY_THEAQ
48 PsiBlast_CBE 80.4737% -93 - C5 -1NG1 7.6 SRP54_THEAQ
40 PsiBlast_CBE 80.4337% -95 - C5 -3NG1 3.7 SRP54_THEAQ
41 PsiBlast_CBE 80.0137% -95 - C5 -3NG1 3.7 SRP54_THEAQ
39 PsiBlast_CBE 80.0137% -90 - C5 -1JPJ 7.6 SRP54_THEAQ
42 PsiBlast_CBE 79.7437% -88 - C5 -2J7P 9.3 SRP54_THEAQ
47 PsiBlast_CBE 79.6937% -87 - C5 -1OKK 2.4 SRP54_THEAQ
53 PsiBlast_CBE 79.6537% -91 - C5 -1O87 7.1 SRP54_THEAQ
109 HHSearch 79.6233% -80 - C5 -3DM5 Error SRP54_PYRFU
52 PsiBlast_CBE 79.4137% -87 - C5 -1O87 7.0 SRP54_THEAQ
37 PsiBlast_CBE 79.0937% -90 - C5 -1JPN 6.5 SRP54_THEAQ
43 PsiBlast_CBE 79.0837% -89 - C5 -2J7P 9.3 SRP54_THEAQ
38 PsiBlast_CBE 78.7937% -91 - C5 -1JPN 7.5 SRP54_THEAQ
35 PsiBlast_CBE 78.5835%-100 - C5 -3DM5 7.0 SRP54_PYRFU
67 PsiBlast_CBE 78.5433% -95 - C5 -4C7O 7.5 SRP54_ECOLI
68 PsiBlast_CBE 78.5233% -97 - C5 -4C7O 7.5 SRP54_ECOLI
36 PsiBlast_CBE 77.8935% -95 - C5 -3DM5 7.5 SRP54_PYRFU
59 PsiBlast_CBE 77.3636% -93 - C5 -2NG1 6.3 SRP54_THEAQ
106 HHSearch 76.1236% -91 - C5 -3E70 7.0 ?
33 PsiBlast_CBE 75.2037% -93 - C5 -3DMD 3.4 ?
32 PsiBlast_CBE 74.7837% -94 - C5 -3DMD 2.3 ?
34 PsiBlast_CBE 74.7237% -95 - C5 -3DMD 2.3 ?
31 PsiBlast_CBE 74.5037% -92 - C5 -3E70 7.0 ?
60 PsiBlast_CBE 74.3836% -82 - C5 -1RJ9 9.4 SRP54_THEAQ