@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0769: (2015-12-03 )
MAFSPIKKLLQDIKSGKMVVLMDDENRENEGDLICAAEMVTKESINFMAKFGKGLICLPLSNYYAEKLELAQMASHNTDNHETAFTISIDHLSTSTGISAEDRALTAKMVANDSSKAKDFRRPGHLFPLLAKEGGVLARNGHTEATVDLCRLAGLKECGLCCEIMAEDGSMMRKDELLAFAQKHDLAIATIKQLQDYRRQEEGGVVREIEIQLPTQFGHFTAYGYSEVVANKEHVALVKGDISSGEDVLCRLHSECLTGDVFHSLRCDCGEQLANALQQIEAEGRGVLLYMRQEGRGIGLINKLKAYHLQEEGLDTLEANLALGFEGDERDYGVSAQLLKDLGINSINLLTNNPDKIQQLEAEGICVKNRVPLQVAATAYDLNYLKTKKEKMGHLLD

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5RP_B_5(4P77)
RIBB_VIBCH
[Raw transfer]



5RP_A_3(4P77)
RIBB_VIBCH
[Raw transfer]



RES_B_7(4P6P)
RIBB_VIBCH
[Raw transfer]



RES_A_3(4P6P)
RIBB_VIBCH
[Raw transfer]



5SP_A_3(3LQU)
RIBB_SALTY
[Raw transfer]



5RP_B_4(1SNN)
RIBB_METJA
[Raw transfer]



5RP_A_3(4P8E)
RIBB_VIBCH
[Raw transfer]



5RP_A_3(1SNN)
RIBB_METJA
[Raw transfer]



5RP_B_4(1PVY)
RIBB_METJA
[Raw transfer]



5RP_D_4(1TKU)
RIB3_CANAL
[Raw transfer]



5RP_B_8(4P8E)
RIBB_VIBCH
[Raw transfer]



5RP_C_3(1TKU)
RIB3_CANAL
[Raw transfer]



RES_A_3(4P6C)
RIBB_VIBCH
[Raw transfer]



RES_B_4(4P6C)
RIBB_VIBCH
[Raw transfer]



GOL_A_5(1K4O)
RIB3_MAGO7
[Raw transfer]



5RP_A_2(2RIU)
RIB3_CANAL
[Raw transfer]



GOL_A_8(4FFJ)
?
[Raw transfer]



GOL_A_5(3MIO)
RIBBA_MYCTA
[Raw transfer]



GOL_A_5(3MIO)
RIBBA_MYCTA
[Raw transfer]



GOL_B_12(3MIO)
RIBBA_MYCTA
[Raw transfer]



EDO_A_3(4P6D)
RIBB_VIBCH
[Raw transfer]
1 PsiBlast_PDB 96.0151%-109 - C7 -4I14 - RIBBA_MYCTA -
15 PsiBlast_PDB 76.8846% -98 - C7 -1K4P - RIB3_MAGO7 -
11 PsiBlast_PDB 75.6746%-101 - C7 -1K49 - RIB3_MAGO7 -
13 PsiBlast_PDB 75.4546% -97 - C7 -1K4L - RIB3_MAGO7 -
12 PsiBlast_PDB 74.9146% -99 - C7 -1K4I - RIB3_MAGO7 -
2 PsiBlast_PDB 74.6658%-109 - C7 -4FFJ 3.0 ?
14 PsiBlast_PDB 74.5246% -98 - C7 -1K4O 3.5 RIB3_MAGO7
60 Fugue 74.1647% -99 - C7 -1K4I - RIB3_MAGO7 -
31 PsiBlast_CBE 74.0342% -97 - C7 -3LS6 - RIBB_SALTY -
53 HHSearch 73.2046% -98 - C7 -1K4I - RIB3_MAGO7 -
22 PsiBlast_CBE 72.8748%-104 - C7 -3MIO 2.7 RIBBA_MYCTA
4 PsiBlast_PDB 72.7548%-107 - C7 -3MK5 - RIBBA_MYCTA -
10 PsiBlast_PDB 72.6048%-108 - C7 -2RIU 3.5 RIB3_CANAL
6 PsiBlast_PDB 72.2148%-105 - C7 -3MIO 2.7 RIBBA_MYCTA
7 PsiBlast_PDB 72.2048%-107 - C7 -1TKS - RIB3_CANAL -
55 HHSearch 72.1248%-103 - C7 -3MIO 2.7 RIBBA_MYCTA
23 PsiBlast_CBE 72.0248%-108 - C7 -1TKU 3.2 RIB3_CANAL
9 PsiBlast_PDB 71.9748%-109 - C7 -2RIS - RIB3_CANAL -
33 PsiBlast_CBE 71.6642%-104 - C7 -3LRJ - RIBB_SALTY -
36 PsiBlast_CBE 71.6442%-100 - C7 -3LQU - RIBB_SALTY -
8 PsiBlast_PDB 71.3348%-107 - C7 -1TKU 3.1 RIB3_CANAL
37 PsiBlast_CBE 70.9842% -99 - C7 -3LQU 3.4 RIBB_SALTY
27 PsiBlast_CBE 70.2744% -98 - C7 -4P6P 4.3 RIBB_VIBCH
25 PsiBlast_CBE 69.3744% -96 - C7 -4P8E 4.1 RIBB_VIBCH
18 PsiBlast_PDB 68.9044%-100 - C7 -4P6P 4.2 RIBB_VIBCH
20 PsiBlast_PDB 68.6544% -99 - C7 -4P8E 3.9 RIBB_VIBCH
17 PsiBlast_PDB 68.6444%-100 - C7 -4P6D 2.7 RIBB_VIBCH
26 PsiBlast_CBE 68.4344% -99 - C7 -4P77 5.0 RIBB_VIBCH
29 PsiBlast_CBE 67.9444% -96 - C7 -4P6C 4.8 RIBB_VIBCH
19 PsiBlast_PDB 67.8644% -95 - C7 -4P77 4.7 RIBB_VIBCH
16 PsiBlast_PDB 66.9544% -94 - C7 -4P6C 4.7 RIBB_VIBCH
54 HHSearch 64.7935% -87 - C7 -1SNN 4.1 RIBB_METJA
46 PsiBlast_CBE 62.3833% -97 - C7 -1SNN 4.1 RIBB_METJA
48 PsiBlast_CBE 62.2433%-100 - C7 -1PVY 3.7 RIBB_METJA