@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0783: (2015-12-03 )
MSRKPFIAGNWKMNKNPEEAKAFIEAVASKLPSSELVEAGIAAPALTLSTVLEAAKGSELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQVSSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK

Atome Classification :

(56 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

G3P_A_3(3UWU)
TPIS_STAAR
[Raw transfer]




PGH_A_3(3TAO)
TPIS_MYCTU
[Raw transfer]




G3P_B_5(3UWU)
TPIS_STAAR
[Raw transfer]




PGA_A_3(1BTM)
TPIS_GEOSE
[Raw transfer]




PGH_A_2(2VXN)
TPIS_LEIME
[Raw transfer]




3PG_A_3(2VFI)
TPIS_PLAFA
[Raw transfer]




PGA_C_3(2BTM)
TPIS_GEOSE
[Raw transfer]




PGA_C_3(2BTM)
TPIS_GEOSE
[Raw transfer]




PGA_A_3(2J27)
TPIS_TRYBB
[Raw transfer]




PGA_D_4(2BTM)
TPIS_GEOSE
[Raw transfer]




PGA_B_4(1BTM)
TPIS_GEOSE
[Raw transfer]




PGA_C_3(2BTM)
TPIS_GEOSE
[Raw transfer]




G2H_A_3(3UWZ)
TPIS_STAAR
[Raw transfer]




PGH_B_4(7TIM)
TPIS_YEAST
[Raw transfer]




PGA_A_2(1LYX)
TPIS_PLAFA
[Raw transfer]




PGA_B_4(2YPI)
TPIS_YEAST
[Raw transfer]




PGA_A_2(4BI6)
TPI1_GIAIN
[Raw transfer]




129_C_3(1IF2)
TPIS_LEIME
[Raw transfer]




PGA_A_3(4FF7)
TPIS_YEAST
[Raw transfer]




3PG_B_6(3UWW)
TPIS_STAAR
[Raw transfer]




3PG_B_4(2VFH)
TPIS_PLAFA
[Raw transfer]




PGA_A_3(2YPI)
TPIS_YEAST
[Raw transfer]




PGH_A_3(7TIM)
TPIS_YEAST
[Raw transfer]




3PG_C_3(1M7O)
TPIS_PLAFA
[Raw transfer]




PGA_A_2(4BI7)
TPI1_GIAIN
[Raw transfer]




PGH_A_3(3YPI)
TPIS_YEAST
[Raw transfer]




GOL_B_4(3GVG)
TPIS_MYCTU
[Raw transfer]




2PG_B_5(1O5X)
TPIS_PLAFA
[Raw transfer]




3PG_B_5(2VFI)
TPIS_PLAFA
[Raw transfer]




GOL_A_3(3GVG)
TPIS_MYCTU
[Raw transfer]




GOL_A_4(2VFE)
TPIS_PLAFA
[Raw transfer]




PGA_F_6(1LZO)
TPIS_PLAFA
[Raw transfer]




GOL_B_6(2VFE)
TPIS_PLAFA
[Raw transfer]




3PG_A_4(3UWW)
TPIS_STAAR
[Raw transfer]




PGA_E_5(1LZO)
TPIS_PLAFA
[Raw transfer]




G3H_C_3(1M7P)
TPIS_PLAFA
[Raw transfer]




G3H_D_4(1M7P)
TPIS_PLAFA
[Raw transfer]




GOL_B_5(3GVG)
TPIS_MYCTU
[Raw transfer]




3PG_D_4(1M7O)
TPIS_PLAFA
[Raw transfer]




TRS_H_8(2I9E)
?
[Raw transfer]




PGH_B_4(3YPI)
TPIS_YEAST
[Raw transfer]




G2H_B_5(3UWZ)
TPIS_STAAR
[Raw transfer]




GOL_B_18(4FF7)
TPIS_YEAST
[Raw transfer]




2PG_A_5(3UWV)
TPIS_STAAR
[Raw transfer]




2PG_B_7(3UWV)
TPIS_STAAR
[Raw transfer]




UVW_A_4(4MVA)
?
[Raw transfer]




CIT_B_5(3M9Y)
TPIS_STAAR
[Raw transfer]




3PY_A_4(1O5X)
TPIS_PLAFA
[Raw transfer]




3PY_A_4(1O5X)
TPIS_PLAFA
[Raw transfer]




PEG_B_9(4MVA)
?
[Raw transfer]




TRS_I_9(2I9E)
?
[Raw transfer]




3 PsiBlast_PDB 91.6958% -88 - C3 -3UWV 2.7 TPIS_STAAR
6 PsiBlast_PDB 91.5758% -88 - C3 -3UWZ 2.1 TPIS_STAAR
4 PsiBlast_PDB 91.2958% -90 - C3 -3UWW 3.8 TPIS_STAAR
2 PsiBlast_PDB 91.2458% -87 - C3 -3UWU 4.3 TPIS_STAAR
5 PsiBlast_PDB 90.7858% -89 - C3 -3UWY - TPIS_STAAR -
25 PsiBlast_CBE 90.7558% -90 - C3 -3UWU 4.1 TPIS_STAAR
24 PsiBlast_CBE 90.7258% -86 - C3 -3UWV 3.2 TPIS_STAAR
23 PsiBlast_CBE 90.6358% -88 - C3 -3UWW 3.3 TPIS_STAAR
21 PsiBlast_CBE 90.5658% -88 - C3 -3M9Y 2.0 TPIS_STAAR
101 HHSearch 90.0154% -88 - C3 -2BTM 4.0 TPIS_GEOSE
106 HHSearch 89.8659% -87 - C3 -3M9Y - TPIS_STAAR -
1 PsiBlast_PDB 89.8058% -88 - C3 -3M9Y - TPIS_STAAR -
22 PsiBlast_CBE 89.6858% -87 - C3 -3UWZ 2.1 TPIS_STAAR
122 Fugue 89.1653% -87 - C3 -2BTM 4.0 TPIS_GEOSE
9 PsiBlast_PDB 89.1652% -92 - C3 -4Y8F - ? -
7 PsiBlast_PDB 88.9254% -84 - C3 -2BTM 4.0 TPIS_GEOSE
26 PsiBlast_CBE 88.4654% -83 - C3 -2BTM 3.1 TPIS_GEOSE
104 HHSearch 87.4044% -89 - C3 -1B9B - PGKT_THEMA -
8 PsiBlast_PDB 86.7753% -84 - C3 -1BTM 3.3 TPIS_GEOSE
10 PsiBlast_PDB 86.6750% -86 - C3 -4Y9A - ? -
27 PsiBlast_CBE 86.1953% -80 - C3 -1BTM 3.2 TPIS_GEOSE
35 PsiBlast_CBE 85.5147% -82 - C3 -3GVG 2.9 TPIS_MYCTU
15 PsiBlast_PDB 85.2147% -81 - C3 -3GVG 2.3 TPIS_MYCTU
59 PsiBlast_CBE 84.3541% -86 * C3 *4BI7 3.1 TPI1_GIAIN
69 PsiBlast_CBE 84.1040% -81 - C3 -4BI6 3.6 TPI1_GIAIN
14 PsiBlast_PDB 83.8747% -80 - C3 -3TAO 4.0 TPIS_MYCTU
109 HHSearch 80.9338% -82 - C3 -2VXN 4.3 TPIS_LEIME
57 PsiBlast_CBE 80.6742% -78 - C3 -2I9E 3.0 ?
55 PsiBlast_CBE 80.5842% -81 - C3 -2I9E 2.9 ?
50 PsiBlast_CBE 80.3242% -86 - C3 -4MVA 3.7 ?
123 Fugue 79.4737% -78 - C3 -1IF2 4.3 TPIS_LEIME
49 PsiBlast_CBE 78.1742% -87 - C3 -4MVA 2.0 ?
103 HHSearch 78.0837% -84 - C3 -2J27 2.8 TPIS_TRYBB
70 PsiBlast_CBE 77.2040% -72 - C3 -4FF7 2.3 TPIS_YEAST
65 PsiBlast_CBE 76.9640% -69 - C3 -7TIM 3.6 TPIS_YEAST
71 PsiBlast_CBE 76.7840% -71 - C3 -4FF7 3.4 TPIS_YEAST
68 PsiBlast_CBE 76.7840% -72 - C3 -2YPI 3.7 TPIS_YEAST
75 PsiBlast_CBE 76.4240% -74 - C3 -3YPI 3.9 TPIS_YEAST
66 PsiBlast_CBE 76.1540% -70 - C3 -7TIM 3.9 TPIS_YEAST
110 HHSearch 75.5936% -86 - C3 -1O5X 3.2 TPIS_PLAFA
74 PsiBlast_CBE 75.3540% -74 - C3 -3YPI 3.4 TPIS_YEAST
100 PsiBlast_CBE 74.1235% -79 - C3 -2VFH 3.1 TPIS_PLAFA
89 PsiBlast_CBE 73.6435% -78 - C3 -2VFI 3.3 TPIS_PLAFA
67 PsiBlast_CBE 73.6040% -66 - C3 -2YPI 3.8 TPIS_YEAST
82 PsiBlast_CBE 73.5636% -77 - C3 -2VFE 2.5 TPIS_PLAFA
92 PsiBlast_CBE 73.2735% -81 - C3 -1O5X 3.2 TPIS_PLAFA
90 PsiBlast_CBE 73.1935% -76 - C3 -2VFI 3.3 TPIS_PLAFA
98 PsiBlast_CBE 72.6835% -83 - C3 -1LZO 1.8 TPIS_PLAFA
93 PsiBlast_CBE 72.6035% -81 - C3 -1M7P 2.7 TPIS_PLAFA
99 PsiBlast_CBE 72.1835% -76 - C3 -1LYX 3.1 TPIS_PLAFA
97 PsiBlast_CBE 72.0235% -79 - C3 -1LZO 1.8 TPIS_PLAFA
94 PsiBlast_CBE 72.0235% -80 - C3 -1M7P 2.1 TPIS_PLAFA
81 PsiBlast_CBE 71.8236% -79 - C3 -2VFE 2.2 TPIS_PLAFA
96 PsiBlast_CBE 71.7035% -80 - C3 -1M7O 2.5 TPIS_PLAFA
95 PsiBlast_CBE 71.6735% -78 - C3 -1M7O 3.8 TPIS_PLAFA
91 PsiBlast_CBE 71.5435% -79 - C3 -1O5X 3.1 TPIS_PLAFA