@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0784: (2015-12-03 )
MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIQAAGIEFDLAFTSVLKRAIKTTNLALEAADQLWVPVEKSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPDMAKDDEHSAHTDRRYASLDDSVIPDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKQLSDDEIMDVEIPNFPPLVFEFDEKLNLVSEYYLGK

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

VO3_A_2(1E59)
GPMA_ECOLI
[Raw transfer]



DG2_A_4(2H4Z)
PMGE_HUMAN
[Raw transfer]



DG2_A_3(3FDZ)
GPMA_BURP1
[Raw transfer]



3PG_B_9(3GP5)
GPMA_BURP1
[Raw transfer]



3PG_A_5(3GP5)
GPMA_BURP1
[Raw transfer]



DG2_B_3(2H4Z)
PMGE_HUMAN
[Raw transfer]



BHC_H_8(1BQ4)
PMG1_YEAST
[Raw transfer]



SEP_A_7(3GP3)
GPMA_BURP1
[Raw transfer]



SEP_D_18(3GP3)
GPMA_BURP1
[Raw transfer]



SEP_A_7(3GP3)
GPMA_BURP1
[Raw transfer]



SEP_B_10(3GP3)
GPMA_BURP1
[Raw transfer]



SEP_C_14(3GP3)
GPMA_BURP1
[Raw transfer]



3PG_B_4(2H52)
PMGE_HUMAN
[Raw transfer]



3PG_A_5(2F90)
PMGE_HUMAN
[Raw transfer]



3PG_A_3(2H52)
PMGE_HUMAN
[Raw transfer]



IHP_J_10(1BQ3)
PMG1_YEAST
[Raw transfer]



3PG_B_4(2A9J)
PMGE_HUMAN
[Raw transfer]



IHP_I_9(1BQ3)
PMG1_YEAST
[Raw transfer]



3PG_B_4(2H4X)
PMGE_HUMAN
[Raw transfer]



3PG_A_3(2H4X)
PMGE_HUMAN
[Raw transfer]



3PG_B_6(2F90)
PMGE_HUMAN
[Raw transfer]



3PG_A_3(2A9J)
PMGE_HUMAN
[Raw transfer]



GOL_A_4(3GW8)
GPMA_BURP1
[Raw transfer]



GOL_B_10(3GW8)
GPMA_BURP1
[Raw transfer]



GOL_B_6(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_A_5(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_A_5(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_D_7(1RII)
GPMA_MYCTU
[Raw transfer]



CIT_B_5(1YFK)
PGAM1_HUMAN
[Raw transfer]



CIT_A_4(1YFK)
PGAM1_HUMAN
[Raw transfer]



3PG_J_10(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_I_9(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_I_9(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_I_9(1QHF)
PMG1_YEAST
[Raw transfer]



EDO_A_5(4EMB)
GPMA_BORBU
[Raw transfer]
7 PsiBlast_PDB 96.5454% -72 - C1 -3GW8 3.8 GPMA_BURP1
102 HHSearch 96.0254% -70 - C1 -3GP3 4.9 GPMA_BURP1
5 PsiBlast_PDB 96.0254% -70 - C1 -3GP3 4.9 GPMA_BURP1
22 PsiBlast_CBE 95.9754% -72 - C1 -3GW8 2.6 GPMA_BURP1
27 PsiBlast_CBE 95.8254% -72 - C1 -3EZN - GPMA_BURP1 -
3 PsiBlast_PDB 95.8154% -73 - C1 -3EZN - GPMA_BURP1 -
23 PsiBlast_CBE 95.7154% -71 - C1 -3GP5 4.8 GPMA_BURP1
2 PsiBlast_PDB 95.4154% -70 - C1 -3LNT - GPMA_BURP1 -
1 PsiBlast_PDB 94.9754% -64 - C1 -1E59 5.3 GPMA_ECOLI
24 PsiBlast_CBE 94.9654% -70 - C1 -3GP3 5.0 GPMA_BURP1
26 PsiBlast_CBE 94.8754% -71 - C1 -3GP3 4.9 GPMA_BURP1
8 PsiBlast_PDB 94.7252% -64 - C1 -4ODI - ? -
6 PsiBlast_PDB 94.6354% -69 - C1 -3GP5 4.4 GPMA_BURP1
39 PsiBlast_CBE 94.4151% -75 - C1 -1BQ4 - PMG1_YEAST -
103 HHSearch 94.3752% -73 - C1 -3KKK - ? -
25 PsiBlast_CBE 94.3254% -70 - C1 -3GP3 4.9 GPMA_BURP1
28 PsiBlast_CBE 94.2952% -65 - C1 -4ODI - ? -
36 PsiBlast_CBE 94.0251% -71 - C1 -5PGM - PMG1_YEAST -
21 PsiBlast_CBE 93.8654% -70 - C1 -3LNT - GPMA_BURP1 -
107 HHSearch 93.8149% -71 - C1 -3D8H - ? -
4 PsiBlast_PDB 93.4254% -65 - C1 -3FDZ 5.5 GPMA_BURP1
11 PsiBlast_PDB 93.2551% -70 - C1 -1BQ3 2.7 PMG1_YEAST
17 PsiBlast_PDB 93.1553% -60 - C1 -1YFK 3.2 PGAM1_HUMAN
9 PsiBlast_PDB 92.5351% -66 - C1 -1QHF 3.7 PMG1_YEAST
108 HHSearch 92.0451% -67 - C1 -1QHF 3.7 PMG1_YEAST
58 PsiBlast_CBE 91.7453% -60 - C1 -1YFK 2.3 PGAM1_HUMAN
15 PsiBlast_PDB 91.7349% -65 - C1 -4EMB 3.6 GPMA_BORBU
41 PsiBlast_CBE 91.4751% -68 - C1 -1BQ4 4.4 PMG1_YEAST
31 PsiBlast_CBE 91.1251% -60 - C1 -1QHF 3.0 PMG1_YEAST
44 PsiBlast_CBE 91.0251% -67 - C1 -1BQ3 3.5 PMG1_YEAST
104 HHSearch 90.8747% -63 - C1 -1RII 2.4 GPMA_MYCTU
126 Fugue 90.7050% -66 - C1 -1QHF 3.7 PMG1_YEAST
68 PsiBlast_CBE 90.6846% -65 - C1 -2F90 5.3 PMGE_HUMAN
65 PsiBlast_CBE 90.6246% -68 - C1 -2H4X 4.0 PMGE_HUMAN
64 PsiBlast_CBE 90.5746% -68 - C1 -2H4Z 5.3 PMGE_HUMAN
62 PsiBlast_CBE 90.5246% -65 - C1 -2H52 4.2 PMGE_HUMAN
67 PsiBlast_CBE 90.5046% -68 - C1 -2F90 4.0 PMGE_HUMAN
70 PsiBlast_CBE 90.3546% -68 - C1 -2A9J 4.2 PMGE_HUMAN
61 PsiBlast_CBE 90.2846% -66 - C1 -2H52 3.9 PMGE_HUMAN
63 PsiBlast_CBE 90.2646% -66 - C1 -2H4Z 5.7 PMGE_HUMAN
69 PsiBlast_CBE 90.0946% -64 - C1 -2A9J 4.1 PMGE_HUMAN
66 PsiBlast_CBE 89.9546% -66 - C1 -2H4X 3.9 PMGE_HUMAN
73 PsiBlast_CBE 88.0248% -57 - C1 -1RII 2.2 GPMA_MYCTU
71 PsiBlast_CBE 87.3848% -55 * C1 *1RII 2.4 GPMA_MYCTU
74 PsiBlast_CBE 87.3448% -57 - C1 -1RII 2.4 GPMA_MYCTU