@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0787: (2015-12-03 )
MSKETLILLYGGRSAEREVSVLSAESVMRAINYDKFFVKTYFITQVGQFIKTQEFDEMPSSDEKLMTNQTVDLDKMVRPSDIYDDNAIVFPVLHGPMGEDGSIQGFLEVLRMPYVGTNILSSSVAMDKITTKQVLATVGVPQVAYQTYFEGDDLEHAIKLSLETLSFPIFVKPANMGSSVGISKATDESSLRSAIDLALKYDSRILIEQGVTAREIEVGILGNNDVKTTFPGEVVKDVDFYDYDAKYIDNKITMDIPAKVDEATMEAMRQYASKAFKAIGACGLSRCDFFLTKDGQIFLNELNTMPGFTQWSMYPLLWENMGLTYSDLIEKLVMLAKEMFEKRESHLI

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_3(1E4E)
VANA_ENTFC
[Raw transfer]



ATP_B_8(2ZDQ)
DDL_THET8
[Raw transfer]



ADP_D_10(2ZDG)
DDL_THET8
[Raw transfer]



ADP_A_3(1E4E)
VANA_ENTFC
[Raw transfer]



ANP_C_6(2YZN)
DDL_THET8
[Raw transfer]



ADP_A_6(2I8C)
DDL_STAAC
[Raw transfer]



ATP_A_7(2ZDQ)
DDL_THET8
[Raw transfer]



ADP_A_5(1EHI)
DDL_LEUMM
[Raw transfer]



ADP_A_5(1EHI)
DDL_LEUMM
[Raw transfer]



ANP_B_5(2YZN)
DDL_THET8
[Raw transfer]



ADP_B_15(1E4E)
VANA_ENTFC
[Raw transfer]



ADP_B_7(2I8C)
DDL_STAAC
[Raw transfer]



ADP_A_5(1EHI)
DDL_LEUMM
[Raw transfer]



ADP_A_5(1EHI)
DDL_LEUMM
[Raw transfer]



ADP_C_9(2ZDG)
DDL_THET8
[Raw transfer]



ADP_D_16(2ZDH)
DDL_THET8
[Raw transfer]



ADP_A_7(2ZDG)
DDL_THET8
[Raw transfer]



ADP_A_12(2ZDH)
DDL_THET8
[Raw transfer]



ADP_A_5(1IOV)
DDLB_ECOLI
[Raw transfer]



ADP_A_5(1EHI)
DDL_LEUMM
[Raw transfer]



ADP_C_15(2ZDH)
DDL_THET8
[Raw transfer]



ADP_B_14(2ZDH)
DDL_THET8
[Raw transfer]



ADP_B_8(2ZDG)
DDL_THET8
[Raw transfer]



ATP_A_2(3R5F)
?
[Raw transfer]



ANP_A_4(2YZN)
DDL_THET8
[Raw transfer]



ANP_A_2(4L1K)
?
[Raw transfer]



ADP_A_4(2DLN)
DDLB_ECOLI
[Raw transfer]



ADP_A_4(1IOW)
DDLB_ECOLI
[Raw transfer]



ADP_A_2(3RFC)
?
[Raw transfer]



ADP_A_3(4ME6)
?
[Raw transfer]



DAL_C_6(2YZM)
DDL_THET8
[Raw transfer]



DAL_B_5(2YZM)
DDL_THET8
[Raw transfer]



DAL_A_4(2YZM)
DDL_THET8
[Raw transfer]



G1L_B_4(2I80)
DDL_STAAC
[Raw transfer]
1 PsiBlast_PDB 98.8574%-125 - C1 -3K3P - DDL_STRMU -
56 HHSearch 96.3775%-121 - C1 -3K3P - DDL_STRMU -
4 PsiBlast_PDB 83.7347%-105 - C1 -2I8C 5.4 DDL_STAAC
22 PsiBlast_CBE 83.2847%-101 - C1 -2I8C 4.6 DDL_STAAC
21 PsiBlast_CBE 83.2647%-101 - C1 -2I80 6.0 DDL_STAAC
23 PsiBlast_CBE 83.1847%-105 - C1 -2I87 - DDL_STAAC -
3 PsiBlast_PDB 83.0947%-101 - C1 -2I87 - DDL_STAAC -
2 PsiBlast_PDB 81.5247%-102 - C1 -2I80 - DDL_STAAC -
57 HHSearch 80.6547% -96 - C1 -2I87 - DDL_STAAC -
24 PsiBlast_CBE 77.9737% -99 - C1 -3I12 - DDLA_SALTY -
11 PsiBlast_PDB 77.9439% -86 - C1 -2ZDQ 8.7 DDL_THET8
13 PsiBlast_PDB 77.7937%-101 - C1 -3E5N - ? -
16 PsiBlast_PDB 77.5837% -97 - C1 -3R5F 6.9 ?
5 PsiBlast_PDB 77.4937% -98 - C1 -3I12 - DDLA_SALTY -
17 PsiBlast_PDB 77.3637% -98 - C1 -4L1K 6.3 ?
27 PsiBlast_CBE 77.2139% -83 - C1 -2ZDQ 8.4 DDL_THET8
15 PsiBlast_PDB 77.1437%-100 - C1 -3RFC 5.1 ?
14 PsiBlast_PDB 77.0837%-101 - C1 -4ME6 4.9 ?
59 HHSearch 77.0236% -99 - C1 -3LWB - DDL_MYCTU -
9 PsiBlast_PDB 77.0139% -91 - C1 -2ZDG 5.9 DDL_THET8
10 PsiBlast_PDB 76.1839% -81 - C1 -2ZDH 6.6 DDL_THET8
36 PsiBlast_CBE 76.0939% -90 - C1 -2YZM 3.8 DDL_THET8
28 PsiBlast_CBE 75.7839% -81 - C1 -2ZDH 6.0 DDL_THET8
29 PsiBlast_CBE 75.7039% -84 - C1 -2ZDH 6.0 DDL_THET8
34 PsiBlast_CBE 75.3939% -89 - C1 -2YZN 4.7 DDL_THET8
31 PsiBlast_CBE 75.3839% -90 - C1 -2ZDG 5.6 DDL_THET8
32 PsiBlast_CBE 75.2639% -82 - C1 -2ZDG 6.7 DDL_THET8
33 PsiBlast_CBE 75.1639% -90 - C1 -2ZDG 5.3 DDL_THET8
30 PsiBlast_CBE 75.1639% -82 - C1 -2ZDH 6.0 DDL_THET8
62 HHSearch 74.8331% -89 - C1 -1EHI 7.1 DDL_LEUMM
39 PsiBlast_CBE 74.7132% -94 - C1 -1EHI 7.1 DDL_LEUMM
76 Fugue 74.6932% -90 - C1 -1EHI 7.1 DDL_LEUMM
77 Fugue 74.5632% -91 - C1 -1EHI 7.1 DDL_LEUMM
8 PsiBlast_PDB 74.1739% -88 - C1 -2YZN 5.1 DDL_THET8
35 PsiBlast_CBE 73.7839% -85 - C1 -2YZN 5.4 DDL_THET8
7 PsiBlast_PDB 73.7339% -87 - C1 -2YZM 3.7 DDL_THET8
37 PsiBlast_CBE 73.5939% -89 - C1 -2YZM 3.4 DDL_THET8
63 HHSearch 70.4932% -82 - C1 -1E4E 6.1 VANA_ENTFC
46 PsiBlast_CBE 69.3433% -87 - C1 -1E4E 5.6 VANA_ENTFC
52 PsiBlast_CBE 68.7931%-100 - C1 -1IOW 5.6 DDLB_ECOLI
49 PsiBlast_CBE 68.7833% -88 - C1 -1E4E 5.6 VANA_ENTFC
51 PsiBlast_CBE 67.6631% -97 - C1 -1IOV 6.3 DDLB_ECOLI
50 PsiBlast_CBE 66.5831% -98 - C1 -2DLN 7.0 DDLB_ECOLI
78 Fugue 55.5831% -87 - C1 -1EHI 7.1 DDL_LEUMM