@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0841: (2015-12-03 )
MTKEYQNYVNGEWKSSVNQIEILSPIDDSSLGFVPAMTREEVDHAMKAGREALPAWAALTVYERAQYLHKAADIIERDKEEIATVLAKEISKAYNASVTEVVRTADLIRYAAEEGIRLSTSADEGGKMDASTGHKLAVIRRQPVGIVLAIAPYNYPVNLSGSKIAPALIGGNVVMFKPPTQGSVSGLVLAKAFAEAGLPAGVFNTITGRGSEIGDYIVEHEEVNFINFTGSTPVGQRIGKLAGMRPIMLELGGKDAGIVLADADLDNAAKQIVAGAYDYSGQRCTAIKRVLVVEEVANELAEKISENVAKLSVGDPFDNATVTPVIDDNSADFIESLVVDARQKGAKELNEFKRDGRLLTPGLFDHVTLDMKLAWEEPFGPILPIIRVKDADEAVAIANKSDFGLQSSVFTRDFQKAFDIANKLEVGTVHINNKTGRGPDNFPFLGLKGSGAGVQGIRYSIEAMTNVKSIVFDMK

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_2(1UXU)
GAPN_THETE
[Raw transfer]



NAP_A_2(1UXV)
GAPN_THETE
[Raw transfer]



NAD_B_6(5AC0)
?
[Raw transfer]



NAP_A_2(1UXR)
GAPN_THETE
[Raw transfer]



NAP_A_3(1UXP)
GAPN_THETE
[Raw transfer]



NAI_A_2(4WB9)
AL1A1_HUMAN
[Raw transfer]



NAP_A_3(1UXN)
GAPN_THETE
[Raw transfer]



NAP_A_2(1UXQ)
GAPN_THETE
[Raw transfer]



NAI_A_9(4X4L)
AL1A1_HUMAN
[Raw transfer]



NAP_A_3(1KY8)
GAPN_THETE
[Raw transfer]



NAD_A_3(1UXT)
GAPN_THETE
[Raw transfer]



TXE_A_4(5AC2)
?
[Raw transfer]



G3H_A_4(1UXU)
GAPN_THETE
[Raw transfer]
123 HHSearch 99.4367% -78 - C4 -1EUH - GAPN_STRMU -
37 PsiBlast_CBE 98.8066% -75 - C4 -2ESD - GAPN_STRMU -
28 PsiBlast_CBE 98.7466% -75 - C4 -1EUH - GAPN_STRMU -
33 PsiBlast_CBE 98.5766% -78 - C4 -2QE0 - GAPN_STRMU -
27 PsiBlast_CBE 98.4966% -75 - C4 -1EUH - GAPN_STRMU -
2 PsiBlast_PDB 98.4466% -76 - C4 -2EUH - GAPN_STRMU -
38 PsiBlast_CBE 98.3566% -75 - C4 -2ESD - GAPN_STRMU -
25 PsiBlast_CBE 98.3566% -76 - C4 -1QI6 - GAPN_STRMU -
22 PsiBlast_CBE 98.3466% -76 - C4 -2EUH - GAPN_STRMU -
6 PsiBlast_PDB 98.3466% -77 - C4 -2QE0 - GAPN_STRMU -
1 PsiBlast_PDB 98.2866% -77 - C4 -1EUH - GAPN_STRMU -
4 PsiBlast_PDB 98.2766% -75 - C4 -2ID2 - GAPN_STRMU -
23 PsiBlast_CBE 98.2466% -76 - C4 -2EUH - GAPN_STRMU -
41 PsiBlast_CBE 98.2266% -72 - C4 -1QI1 - GAPN_STRMU -
3 PsiBlast_PDB 98.2266% -75 - C4 -1QI6 - GAPN_STRMU -
21 PsiBlast_CBE 98.2166% -76 - C4 -2EUH - GAPN_STRMU -
30 PsiBlast_CBE 98.2066% -74 - C4 -2ID2 - GAPN_STRMU -
34 PsiBlast_CBE 98.0766% -76 - C4 -2QE0 - GAPN_STRMU -
29 PsiBlast_CBE 97.9966% -77 - C4 -1EUH - GAPN_STRMU -
39 PsiBlast_CBE 97.7666% -72 - C4 -1QI1 - GAPN_STRMU -
94 PsiBlast_CBE 83.2733% -69 - C4 -5AC0 10.0 ?
77 PsiBlast_CBE 83.0237% -66 - C4 -1UXU 6.3 GAPN_THETE
17 PsiBlast_PDB 82.4137% -63 - C4 -1UXN 7.5 GAPN_THETE
16 PsiBlast_PDB 82.3037% -65 - C4 -1KY8 8.7 GAPN_THETE
79 PsiBlast_CBE 82.1037% -63 - C4 -1UXV 8.4 GAPN_THETE
20 PsiBlast_PDB 82.0137% -63 - C4 -1UXR 8.8 GAPN_THETE
80 PsiBlast_CBE 81.9134% -69 - C4 -4X4L 9.2 AL1A1_HUMAN
19 PsiBlast_PDB 81.8237% -62 - C4 -1UXQ 8.5 GAPN_THETE
78 PsiBlast_CBE 81.5237% -62 - C4 -1UXT 8.6 GAPN_THETE
18 PsiBlast_PDB 81.4737% -64 - C4 -1UXP 7.7 GAPN_THETE
85 PsiBlast_CBE 81.3134% -67 - C4 -4WB9 8.8 AL1A1_HUMAN
83 PsiBlast_CBE 81.0334% -68 - C4 -5AC2 8.9 ?