@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0858: (2015-12-03 )
MTYLAPVLTIAGTDPSGGAGIMADLKTFQARRTYGMAVVTSVVAQNTCGVRGVQHIETAIIDQQLACVYDDIKPKAVKTGMLAERETISLVASYLKKYPQPYVLDPVMVATSGHRLIDSDAVEALKEDLLPLATIITPNLPEAEILVGYDLSDEVSIIKAGYDIQKQYSVRNVLIKGGHLDGLAKDYLFLEKEGLITLSNQRINTIHTHGTGCTFAAVVAAELAKGQSILNAVSTAKSFITSAIETAPELGLGNGPVNHTSYQGD

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_H_8(2I5B)
PDXK_BACSU
[Raw transfer]



ACP_B_8(4C5N)
?
[Raw transfer]



ACP_C_12(4C5N)
?
[Raw transfer]



ACP_A_6(4C5N)
?
[Raw transfer]



ACP_D_16(4C5N)
?
[Raw transfer]



ADP_G_7(2I5B)
PDXK_BACSU
[Raw transfer]



ADP_G_7(2I5B)
PDXK_BACSU
[Raw transfer]



ADP_B_9(4C5K)
?
[Raw transfer]



ADP_A_5(4C5K)
?
[Raw transfer]



ADP_C_13(4C5K)
?
[Raw transfer]



HMH_H_8(1JXI)
THID_SALTY
[Raw transfer]



UEG_C_10(4C5L)
?
[Raw transfer]



ACP_C_15(4C5M)
?
[Raw transfer]



ADP_D_17(4C5K)
?
[Raw transfer]



ACP_B_10(4C5M)
?
[Raw transfer]



ACP_D_20(4C5M)
?
[Raw transfer]



UEG_A_5(4C5L)
?
[Raw transfer]



ACP_A_5(4C5M)
?
[Raw transfer]



UEG_D_11(4C5L)
?
[Raw transfer]



HMH_G_7(1JXI)
THID_SALTY
[Raw transfer]
22 PsiBlast_CBE 91.7144%-102 - C2 -1JXI 3.6 THID_SALTY
81 HHSearch 90.9843% -94 - C2 -1UB0 - ? -
3 PsiBlast_PDB 90.9844%-100 - C2 -1JXI 3.7 THID_SALTY
2 PsiBlast_PDB 90.7144%-106 - C2 -1JXH - THID_SALTY -
23 PsiBlast_CBE 90.6544%-106 - C2 -1JXH - THID_SALTY -
80 HHSearch 89.0443%-104 - C2 -1JXH - THID_SALTY -
21 PsiBlast_CBE 87.8046%-104 - C2 -4JJP - ? -
4 PsiBlast_PDB 87.5841% -85 - C2 -2I5B 4.5 PDXK_BACSU
83 HHSearch 87.4142% -84 - C2 -2I5B 6.7 PDXK_BACSU
25 PsiBlast_CBE 86.9841% -85 - C2 -2I5B - PDXK_BACSU -
26 PsiBlast_CBE 86.8741% -83 - C2 -2I5B 2.9 PDXK_BACSU
1 PsiBlast_PDB 86.6546%-100 - C2 -4JJP - ? -
24 PsiBlast_CBE 86.3841% -84 - C2 -2I5B - PDXK_BACSU -
27 PsiBlast_CBE 86.2441% -81 - C2 -2I5B - PDXK_BACSU -
82 HHSearch 85.5238% -93 - C2 -3RM5 - THI20_YEAST -
37 PsiBlast_CBE 84.1137% -79 - C2 -4C5K 5.2 ?
70 Fugue 83.8441% -86 - C2 -1JXH - THID_SALTY -
7 PsiBlast_PDB 83.3137% -80 - C2 -4C5L 2.9 ?
29 PsiBlast_CBE 83.2237% -78 - C2 -4C5N 6.5 ?
5 PsiBlast_PDB 83.1937% -77 - C2 -4C5J - ? -
28 PsiBlast_CBE 83.0237% -78 - C2 -4C5N 6.4 ?
33 PsiBlast_CBE 82.9637% -80 - C2 -4C5M 5.7 ?
38 PsiBlast_CBE 82.9337% -80 - C2 -4C5K 5.4 ?
6 PsiBlast_PDB 82.2937% -80 - C2 -4C5K 5.3 ?
30 PsiBlast_CBE 82.1837% -78 - C2 -4C5N 6.5 ?
34 PsiBlast_CBE 82.1037% -76 - C2 -4C5L 2.6 ?
32 PsiBlast_CBE 82.0037% -80 - C2 -4C5M 5.4 ?
36 PsiBlast_CBE 81.9137% -78 - C2 -4C5K 5.9 ?
8 PsiBlast_PDB 81.8437% -77 - C2 -4C5M 4.5 ?
9 PsiBlast_PDB 80.8637% -80 - C2 -4C5N 6.3 ?
35 PsiBlast_CBE 80.7837% -73 - C2 -4C5L 3.1 ?
31 PsiBlast_CBE 80.3637% -77 - C2 -4C5M 5.0 ?