@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0860: (2015-12-03 )
MKDTLKLYFVCGTVDCSRKNILTVVEEALQAGITLFQFREKGFTALQGKEKIAMAKQLQILCKQYQVPFIIDDDIDLVELIDADGLHIGQNDLPVDEARRRLPDKIIGLSVSTMAEYQKSQLSVVDYIGIGPFNPTQSKADAKPAVGNRTTKAVREINQDIPIVAIGGITSDFVHDIIESGADGIAVISAISKANHIVDATRQLRYEVEKALVNRQKRSDVIK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FTP_A_5(1G4T)
THIE_BACSU
[Raw transfer]




FTP_B_6(1G4T)
THIE_BACSU
[Raw transfer]




TPS_B_6(1G4S)
THIE_BACSU
[Raw transfer]




TPS_A_5(2TPS)
THIE_BACSU
[Raw transfer]




TPS_A_5(2TPS)
THIE_BACSU
[Raw transfer]




TPS_A_5(2TPS)
THIE_BACSU
[Raw transfer]




TPS_A_5(1G4S)
THIE_BACSU
[Raw transfer]




FQP_A_5(1G4P)
THIE_BACSU
[Raw transfer]




IFP_A_5(1G6C)
THIE_BACSU
[Raw transfer]




ICP_A_5(1G69)
THIE_BACSU
[Raw transfer]




3NM_A_2(3O15)
THIE_BACSU
[Raw transfer]




ICP_A_5(1G67)
THIE_BACSU
[Raw transfer]




TZP_A_7(1G69)
THIE_BACSU
[Raw transfer]




TZP_B_10(1G69)
THIE_BACSU
[Raw transfer]




TZP_B_10(1G67)
THIE_BACSU
[Raw transfer]




TZP_A_7(1G67)
THIE_BACSU
[Raw transfer]




TZP_A_7(1G67)
THIE_BACSU
[Raw transfer]




TZP_A_7(1G6C)
THIE_BACSU
[Raw transfer]




POP_A_6(1G67)
THIE_BACSU
[Raw transfer]




POP_B_9(1G69)
THIE_BACSU
[Raw transfer]




10 PsiBlast_PDB 92.9241%-127 - C2 -3O16 - THIE_BACSU -
7 PsiBlast_PDB 92.3841%-121 - C2 -1G4E - THIE_BACSU -
5 PsiBlast_PDB 91.7341%-119 - C2 -1G4P 5.8 THIE_BACSU
75 Fugue 91.4942%-110 * C2 *2TPS 7.9 THIE_BACSU
22 PsiBlast_CBE 91.4241%-111 - C2 -1G4T 8.5 THIE_BACSU
3 PsiBlast_PDB 91.4041%-112 - C2 -1G4T 8.4 THIE_BACSU
6 PsiBlast_PDB 91.0741%-112 - C2 -1G4S 7.5 THIE_BACSU
9 PsiBlast_PDB 91.0041%-112 - C2 -1G69 5.1 THIE_BACSU
27 PsiBlast_CBE 90.8641%-112 - C2 -1G69 5.3 THIE_BACSU
24 PsiBlast_CBE 90.8641%-110 - C2 -1G4S 7.9 THIE_BACSU
4 PsiBlast_PDB 90.8141%-111 - C2 -1G67 4.9 THIE_BACSU
74 Fugue 90.7641%-109 - C2 -1G67 4.9 THIE_BACSU
2 PsiBlast_PDB 90.5641%-113 - C2 -2TPS 7.9 THIE_BACSU
8 PsiBlast_PDB 90.4841%-111 - C2 -1G6C 5.2 THIE_BACSU
23 PsiBlast_CBE 90.1641%-111 - C2 -1G67 5.1 THIE_BACSU
56 HHSearch 89.8842%-116 - C2 -2TPS 7.9 THIE_BACSU
1 PsiBlast_PDB 89.3841%-112 - C2 -3O15 4.3 THIE_BACSU
28 PsiBlast_CBE 87.5735%-123 - C2 -1XI3 - THIE_PYRFU -
11 PsiBlast_PDB 86.0435%-120 - C2 -1XI3 - THIE_PYRFU -
13 PsiBlast_PDB 85.5434%-131 - C2 -3NL2 - ? -