@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0868: (2015-12-03 )
MENRMNELVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEEQHPENILPNSPTHRVGGLVLEGFEKYQHEYPLYSLQDAFSKEELIAFDKRVKAEFPTASYMAELKIDGLSVSLTYVNGILQVGATRGDGNIGENITENLKRVHDIPLHLDQSLDITVRGECYLPKESFEAINIEKRANGEQEFANPRNAAAGTLRQLNTGIVAKRKLATFLYQEASPTQKETQDDVLKELESYGFSVNHHRLISSSMEKIWDFIQTIEKDRISLPYDIDGIVIKVNSLAMQEELGFTVKAPRWAIAYKFPAEEKEAEILSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRIGDTVVVYKAGDIIPAVLNVVMSKRNQQEVMLIPKLCPSCGSELVHFEDEVALRCINPLCPNQIKERLAHFASRDAMNITGFGPSLVEKLFDAHLIADVADIYRLSIEDLLTLDGIKEKSATKIYHAIQSSKENSAEKLLFGLGIRHVGSKASRLLLEEFGNLRQLSQASQESIASIDGLGGVIAKSLHTFFEKEEVDKLLEELTSYNVNFNYLGKRVSTDAQLSGLTVVLTGKLEKMTRNEAKEKLQNLGAKVTGSVSKKTDLIVAGSDAGSKLTKAQDLGITIQDEDWLLNL

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3BA_A_7(3BAA)
DNLJ_ENTFA
[Raw transfer]




3BD_A_7(3BAB)
DNLJ_ENTFA
[Raw transfer]




0OW_A_5(4EFB)
DNLJ_ENTFA
[Raw transfer]




AMP_D_10(2OWO)
DNLJ_ECOLI
[Raw transfer]




3B8_A_6(3BA8)
DNLJ_ENTFA
[Raw transfer]




0XT_B_6(4GLW)
DNLJ_STRZP
[Raw transfer]




GOL_E_5(1TA8)
DNLJ_ENTFA
[Raw transfer]




0XT_A_4(4GLW)
DNLJ_STRZP
[Raw transfer]




3B9_A_7(3BA9)
DNLJ_ENTFA
[Raw transfer]




IVH_A_2(3PN1)
DNLJ_HAEIN
[Raw transfer]




0OX_A_5(4EEQ)
DNLJ_ENTFA
[Raw transfer]




0OV_A_5(4EFE)
DNLJ_ENTFA
[Raw transfer]




3B9_A_5(3BAC)
DNLJ_HAEIN
[Raw transfer]




AMP_A_3(3UQ8)
DNLJ_HAEIN
[Raw transfer]




AMP_A_3(3UQ8)
DNLJ_HAEIN
[Raw transfer]




0XS_A_7(4GLX)
DNLJ_ECOLI
[Raw transfer]




AMP_B_2(1ZAU)
DNLJ_MYCTU
[Raw transfer]




AMP_B_2(1ZAU)
DNLJ_MYCTU
[Raw transfer]




AMP_A_5(1DGS)
DNLJ_THEFI
[Raw transfer]




AMP_A_5(1DGS)
DNLJ_THEFI
[Raw transfer]




1X8_A_2(4LH7)
DNLJ_ENTFA
[Raw transfer]




L5Y_A_3(4CC6)
DNLJ_STAAU
[Raw transfer]




AMP_B_6(1DGS)
DNLJ_THEFI
[Raw transfer]




1X7_A_2(4LH6)
DNLJ_ENTFA
[Raw transfer]




L5V_A_3(4CC5)
DNLJ_STAAU
[Raw transfer]




NACID_C_2(2OWO)
DNLJ_ECOLI
[Raw transfer]

-

NACID_C_2(2OWO)
DNLJ_ECOLI
[Raw transfer]

-

NACID_C_2(4GLX)
DNLJ_ECOLI
[Raw transfer]

-

1 PsiBlast_PDB 87.1043% -86 - C1 -2OWO 7.1 DNLJ_ECOLI
36 HHSearch 86.6944% -85 - C1 -2OWO 7.1 DNLJ_ECOLI
2 PsiBlast_PDB 85.7342% -89 - C1 -4GLX 7.5 DNLJ_ECOLI
22 PsiBlast_CBE 83.9842% -73 - C1 -1DGS 5.5 DNLJ_THEFI
58 Fugue 83.4941% -74 - C1 -1DGS 5.5 DNLJ_THEFI
4 PsiBlast_PDB 83.4642% -72 - C1 -1DGS 5.5 DNLJ_THEFI
23 PsiBlast_CBE 78.1144% -67 - C1 -1V9P - DNLJ_THEFI -
5 PsiBlast_PDB 78.1044% -74 - C1 -1V9P - DNLJ_THEFI -
21 PsiBlast_CBE 67.0868% -66 - C1 -4GLW 4.8 DNLJ_STRZP
3 PsiBlast_PDB 65.9668% -64 - C1 -4GLW 5.2 DNLJ_STRZP
15 PsiBlast_PDB 64.1956% -58 - C1 -4EEQ 4.9 DNLJ_ENTFA
12 PsiBlast_PDB 64.0556% -61 - C1 -3BA9 7.2 DNLJ_ENTFA
13 PsiBlast_PDB 63.9756% -61 - C1 -3BAA 7.1 DNLJ_ENTFA
7 PsiBlast_PDB 63.7656% -59 - C1 -1TA8 3.5 DNLJ_ENTFA
17 PsiBlast_PDB 63.7556% -62 - C1 -4EFE 6.0 DNLJ_ENTFA
16 PsiBlast_PDB 63.5956% -63 - C1 -4EFB 6.8 DNLJ_ENTFA
11 PsiBlast_PDB 63.5656% -60 - C1 -3BA8 6.3 DNLJ_ENTFA
14 PsiBlast_PDB 63.5456% -59 - C1 -3BAB 8.1 DNLJ_ENTFA
8 PsiBlast_PDB 63.0656% -60 - C1 -4LH6 4.8 DNLJ_ENTFA
9 PsiBlast_PDB 62.9756% -57 - C1 -4LH7 4.8 DNLJ_ENTFA
19 PsiBlast_PDB 62.1851% -54 - C1 -4CC5 4.0 DNLJ_STAAU
20 PsiBlast_PDB 60.9851% -53 - C1 -4CC6 7.4 DNLJ_STAAU
28 PsiBlast_CBE 59.9943% -54 - C1 -3UQ8 6.8 DNLJ_HAEIN
38 HHSearch 59.5844% -51 - C1 -3UQ8 6.8 DNLJ_HAEIN
29 PsiBlast_CBE 58.6843% -57 - C1 -3PN1 7.1 DNLJ_HAEIN
41 HHSearch 55.1738% -42 - C1 -1ZAU 4.7 DNLJ_MYCTU
30 PsiBlast_CBE 53.8537% -46 - C1 -1ZAU 4.8 DNLJ_MYCTU
31 PsiBlast_CBE 51.9844% -54 - C1 -3BAC 7.3 DNLJ_HAEIN