@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0883: (2015-12-04 )
MDKIIVEGGQTRLQGQVVIEGAKNAVLPLLAATILPSQGKTLLTNVPILSDVFTMNNVVRGLDIQVDFNCDKKEILVDASGDILDVAPYEFVSQMRASIVVLGPILARNGHAKVSMPGGCTIGSRPIDLHLKGLEAMGATITQNGGDITAQAEKLKGANIYMDFPSVGATQNLMMAATLASGTTTIENAAREPEIVDLAQLLNKMGAKVKGAGTETLTIIGVDALHGTEHDVVQDRIEAGTFMVAAAMTSGNVLVKDAIWEHNRPLISKLMEMGVEVSEEEDGIRVKADTKKLKPVTVKTLPHPGFPTDMQAQFTALMAVVNGESTMIETVFENRFQHLEEMRRMGLQTEILRDTAMIHGGRALQGAPVMSTDLRASAALILAGMVAQGQTVVGQLTHLDRGYYQFHEKLAALGANIKRVSEA

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TET_D_4(1A2N)
MURA_ECOLI
[Raw transfer]



UD1_D_4(1UAE)
MURA_ECOLI
[Raw transfer]



UD1_A_6(2RL2)
MURA_HAEIN
[Raw transfer]



EPU_A_3(2YVW)
MURA_AQUAE
[Raw transfer]



EPU_A_3(2YVW)
MURA_AQUAE
[Raw transfer]



FLC_A_2(3ZH4)
?
[Raw transfer]



FLC_A_2(3ZH4)
?
[Raw transfer]



FCN_G_7(1UAE)
MURA_ECOLI
[Raw transfer]



PEG_A_3(3ZH4)
?
[Raw transfer]



GG6_A_5(2RL2)
MURA_HAEIN
[Raw transfer]
32 HHSearch 96.4562%-100 - C6 -3R38 - MURA1_LISMO -
1 PsiBlast_PDB 96.3361%-100 - C6 -3R38 - MURA1_LISMO -
21 PsiBlast_CBE 94.4358%-100 - C6 -3SG1 - MURA1_BACAN -
2 PsiBlast_PDB 94.3458% -99 - C6 -3SG1 - MURA1_BACAN -
10 PsiBlast_PDB 91.0650% -96 - C6 -3SPB - MURA_ENTCC -
5 PsiBlast_PDB 90.8749% -92 - C6 -4R7U - MURA_VIBCH -
25 PsiBlast_CBE 90.8549% -95 - C6 -4R7U - MURA_VIBCH -
27 PsiBlast_CBE 90.7549% -94 - C6 -4R7U - MURA_VIBCH -
28 PsiBlast_CBE 90.7450% -93 - C6 -5BQ2 - ? -
30 PsiBlast_CBE 90.5750% -93 - C6 -5BQ2 - ? -
3 PsiBlast_PDB 90.4550% -93 - C6 -5BQ2 - ? -
29 PsiBlast_CBE 90.3350% -91 - C6 -5BQ2 - ? -
24 PsiBlast_CBE 89.7449% -96 - C6 -3VCY - MURA_VIBFM -
23 PsiBlast_CBE 89.6249% -95 - C6 -3VCY - MURA_VIBFM -
26 PsiBlast_CBE 89.4549% -93 - C6 -4R7U - MURA_VIBCH -
4 PsiBlast_PDB 89.3949% -94 - C6 -3VCY - MURA_VIBFM -
8 PsiBlast_PDB 89.3350% -89 - C6 -1UAE 7.7 MURA_ECOLI
31 PsiBlast_CBE 89.2250% -98 - C6 -1NAW - MURA_ENTCC -
9 PsiBlast_PDB 88.9250% -95 - C6 -1NAW - MURA_ENTCC -
22 PsiBlast_CBE 88.7149% -94 - C6 -3VCY - MURA_VIBFM -
7 PsiBlast_PDB 88.3550% -90 - C6 -2RL2 5.4 MURA_HAEIN
11 PsiBlast_PDB 87.0950% -87 - C6 -1A2N 9.0 MURA_ECOLI
14 PsiBlast_PDB 83.2242% -92 - C6 -2YVW 6.9 MURA_AQUAE
36 HHSearch 82.5743% -93 - C6 -2YVW 4.6 MURA_AQUAE
33 HHSearch 80.8044% -89 - C6 -3ZH4 4.1 ?
13 PsiBlast_PDB 79.9344% -85 - C6 -3ZH4 4.1 ?