@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0886: (2015-12-04 )
MDLQKQLEELKISTQEKLKEMTGNHTKELQDLRVQVLGKKGSLTELLKGLKDLSNDLRPVVGKQVNEVRDILTKAFEEQAKVVEAAKIQAQLESESVDVTLPGRQMTLGHRHVLTQTSEEIEDIFLGMGFQVVGGFEVEKDYYNFERMNLPKDHPARDMQDTFYITEEILLRTHTSPVQARTMDQHDFSKGPLKMISPGRVFRRDTDDATHSHQFHQIEGLVVGENISMGDLKGTLQLISQKMFGAERKIRLRPSYFPFTEPSVEVDVSCFKCGGKGCNVCKQTGWIEILGAGMVHPSVLEMSGIDSEKYSGFAFGLGQERIAMLRYGINDIRGFYQGDVRFTDQF

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FYA_A_4(1B7Y)
SYFA_THETH
[Raw transfer]



FYA_A_4(1B7Y)
SYFA_THETH
[Raw transfer]



YSA_A_5(2ALY)
SYFA_THETH
[Raw transfer]



FA5_A_5(1JJC)
SYFA_THET8
[Raw transfer]



FA5_A_3(3CMQ)
SYFM_HUMAN
[Raw transfer]



TYR_A_5(2AMC)
SYFA_THETH
[Raw transfer]



PHE_A_4(1B70)
SYFA_THETH
[Raw transfer]



FA5_A_3(3CMQ)
SYFM_HUMAN
[Raw transfer]



PHE_A_3(4TVA)
SYFA_THETH
[Raw transfer]



200_A_5(2AKW)
SYFA_THETH
[Raw transfer]



GAX_A_4(2RHQ)
SYFA_STAHJ
[Raw transfer]



GAX_A_4(2RHQ)
SYFA_STAHJ
[Raw transfer]



DAH_A_3(3TEH)
SYFA_THETH
[Raw transfer]



MTY_A_3(3HFZ)
SYFA_THET8
[Raw transfer]
1 PsiBlast_PDB 96.4172% -93 - C4 -2RHQ 7.0 SYFA_STAHJ
36 HHSearch 95.7770% -94 - C4 -2RHQ 7.0 SYFA_STAHJ
21 PsiBlast_CBE 94.4572% -90 - C4 -2RHS - SYFA_STAHJ -
2 PsiBlast_PDB 93.3772% -88 - C4 -2RHS - SYFA_STAHJ -
54 Fugue 90.3546% -76 - C4 -1EIY - SYFA_THET8 -
10 PsiBlast_PDB 89.9843% -79 - C4 -1EIY - SYFA_THET8 -
13 PsiBlast_PDB 88.8943% -77 - C4 -2IY5 - SYFA_THETH -
25 PsiBlast_CBE 86.7751% -83 - C4 -4P72 - SYFA_PSEAE -
26 PsiBlast_CBE 86.6744% -63 - C4 -3PCO - ? -
3 PsiBlast_PDB 86.5451% -88 - C4 -4P71 - SYFA_PSEAE -
24 PsiBlast_CBE 86.3451% -84 - C4 -4P73 - SYFA_PSEAE -
5 PsiBlast_PDB 85.9851% -88 - C4 -4P73 - SYFA_PSEAE -
23 PsiBlast_CBE 85.7951% -85 - C4 -4P74 - SYFA_PSEAE -
7 PsiBlast_PDB 85.6151% -86 - C4 -4P75 - SYFA_PSEAE -
22 PsiBlast_CBE 85.4051% -83 - C4 -4P75 - SYFA_PSEAE -
6 PsiBlast_PDB 84.8751% -85 - C4 -4P74 - SYFA_PSEAE -
19 PsiBlast_PDB 84.6144% -90 - C4 -2AMC 3.9 SYFA_THETH
4 PsiBlast_PDB 84.4951% -87 - C4 -4P72 - SYFA_PSEAE -
14 PsiBlast_PDB 84.4843% -86 - C4 -3HFZ 4.3 SYFA_THET8
12 PsiBlast_PDB 84.4143% -87 - C4 -1JJC 9.8 SYFA_THET8
15 PsiBlast_PDB 84.2243% -88 - C4 -3TEH 3.1 SYFA_THETH
17 PsiBlast_PDB 84.2044% -86 - C4 -2AKW 4.4 SYFA_THETH
18 PsiBlast_PDB 83.6544% -82 - C4 -2ALY 9.8 SYFA_THETH
16 PsiBlast_PDB 83.3243% -87 - C4 -4TVA 4.6 SYFA_THETH
11 PsiBlast_PDB 83.3243% -82 - C4 -1B70 4.0 SYFA_THETH
35 HHSearch 83.1745% -87 - C4 -1B7Y 8.9 SYFA_THETH
9 PsiBlast_PDB 82.7443% -86 - C4 -1B7Y 8.9 SYFA_THETH
58 Fugue 75.8030% -57 - C4 -3CMQ 6.8 SYFM_HUMAN
42 HHSearch 70.6332% -63 - C4 -3CMQ 6.5 SYFM_HUMAN