@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0939: (2015-12-04 )
MNNEFINFDRISRENWKDLHQQSQALLTEKELESIKSLNDNINIQDVIDIYLPLINLIQIYKRSQENLSFSKAIFLKKENYQRPFIIGISGSVAVGKSTTSRLLQLLISRTFKDSHVELVTTDGFLYPNEKLIQNGILNRKGFPESYDMESLLNFLDTIKNGITAKIPIYSHEIYDIVPNQLQTIETPDFLILEGINVFQNQQNHRLYMNDYFDFSIYIDAENKQIEEWYLQRFNSLLQLAEADPSNYYHKFTQIPPHKAMELAKDIWKTINLVNLEKYIEPTRNRADFIIHKGKHHKIDEIYLKK

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COK_A_2(2GEV)
COAA_MYCTU
[Raw transfer]




COA_A_2(2ZSD)
COAA_MYCTU
[Raw transfer]




COK_C_3(2GES)
COAA_MYCTU
[Raw transfer]




COK_A_2(2GEU)
COAA_MYCTU
[Raw transfer]




COK_C_3(2GET)
COAA_MYCTU
[Raw transfer]




ZVU_B_6(4BFU)
COAA_MYCTU
[Raw transfer]




ZVT_A_4(4BFT)
COAA_MYCTU
[Raw transfer]




ZVW_B_6(4BFW)
COAA_MYCTU
[Raw transfer]




ZVU_A_4(4BFU)
COAA_MYCTU
[Raw transfer]




ZVS_A_2(4BFS)
COAA_MYCTU
[Raw transfer]




ZVT_B_6(4BFT)
COAA_MYCTU
[Raw transfer]




ZVV_A_4(4BFV)
COAA_MYCTU
[Raw transfer]




ZVW_A_4(4BFW)
COAA_MYCTU
[Raw transfer]




ZVX_B_6(4BFX)
COAA_MYCTU
[Raw transfer]




ZVY_A_4(4BFY)
COAA_MYCTU
[Raw transfer]




ZVV_B_6(4BFV)
COAA_MYCTU
[Raw transfer]




ZVY_B_6(4BFY)
COAA_MYCTU
[Raw transfer]




ZVZ_A_4(4BFZ)
COAA_MYCTU
[Raw transfer]




ZVX_A_4(4BFX)
COAA_MYCTU
[Raw transfer]




MV1_A_2(3AVQ)
COAA_MYCTU
[Raw transfer]




GOL_A_9(3AVO)
COAA_MYCTU
[Raw transfer]




GOL_A_11(2ZS7)
COAA_MYCTU
[Raw transfer]




ZVZ_B_6(4BFZ)
COAA_MYCTU
[Raw transfer]




MV2_A_2(3AVP)
COAA_MYCTU
[Raw transfer]




ACP_A_2(3AF2)
COAA_MYCTU
[Raw transfer]




ATP_A_2(2ZSF)
COAA_MYCTU
[Raw transfer]




ADP_A_2(2ZS8)
COAA_MYCTU
[Raw transfer]




GCP_A_2(3AF4)
COAA_MYCTU
[Raw transfer]




ADP_A_2(2ZS9)
COAA_MYCTU
[Raw transfer]




GCP_A_2(3AF3)
COAA_MYCTU
[Raw transfer]




PAU_A_3(3AVO)
COAA_MYCTU
[Raw transfer]




ADP_N_14(1SQ5)
COAA_ECOLI
[Raw transfer]




ADP_B_6(4NE2)
COAA_KLEP3
[Raw transfer]




ADP_A_3(3TQC)
COAA_COXBU
[Raw transfer]




ADP_A_3(4NE2)
COAA_KLEP3
[Raw transfer]




ADP_A_3(3TQC)
COAA_COXBU
[Raw transfer]




ADP_R_18(1SQ5)
COAA_ECOLI
[Raw transfer]




ADP_A_2(2ZSB)
COAA_MYCTU
[Raw transfer]




ADP_A_2(2ZSA)
COAA_MYCTU
[Raw transfer]




GDP_A_2(3AF1)
COAA_MYCTU
[Raw transfer]




ADP_B_4(3TQC)
COAA_COXBU
[Raw transfer]




GDP_A_2(3AF0)
COAA_MYCTU
[Raw transfer]




GDP_A_2(3AEZ)
COAA_MYCTU
[Raw transfer]




ACP_A_2(2ZSE)
COAA_MYCTU
[Raw transfer]




FLC_A_3(2ZS7)
COAA_MYCTU
[Raw transfer]




6 PsiBlast_PDB 97.8342% -97 - C3 -3AVQ 5.1 COAA_MYCTU
19 PsiBlast_PDB 96.7342% -97 - C3 -3AEZ 6.8 COAA_MYCTU
56 PsiBlast_CBE 96.5042%-101 - C3 -3AF1 6.4 COAA_MYCTU
14 PsiBlast_PDB 96.4042%-100 - C3 -2ZSA 6.3 COAA_MYCTU
13 PsiBlast_PDB 96.3742% -99 - C3 -2ZS9 6.8 COAA_MYCTU
53 PsiBlast_CBE 96.3442% -99 - C3 -3AF4 6.8 COAA_MYCTU
44 PsiBlast_CBE 96.3442%-103 - C3 -4BFW 7.9 COAA_MYCTU
51 PsiBlast_CBE 96.3042%-103 - C3 -4BFS 7.3 COAA_MYCTU
8 PsiBlast_PDB 96.2342%-101 - C3 -2GET 6.4 COAA_MYCTU
27 PsiBlast_CBE 96.0741%-101 - C3 -4GI7 - COAA_KLEP3 -
40 PsiBlast_CBE 96.0242% -99 - C3 -4BFY 6.8 COAA_MYCTU
20 PsiBlast_PDB 95.9142%-100 - C3 -3AF0 5.8 COAA_MYCTU
3 PsiBlast_PDB 95.8941%-104 - C3 -4NE2 7.1 COAA_KLEP3
47 PsiBlast_CBE 95.8242%-100 - C3 -4BFU 8.1 COAA_MYCTU
38 PsiBlast_CBE 95.8242%-100 - C3 -4BFZ 7.0 COAA_MYCTU
48 PsiBlast_CBE 95.8042%-100 - C3 -4BFU 8.1 COAA_MYCTU
17 PsiBlast_PDB 95.8042% -96 - C3 -2ZSE 5.2 COAA_MYCTU
11 PsiBlast_PDB 95.7842%-101 - C3 -2ZS7 3.0 COAA_MYCTU
16 PsiBlast_PDB 95.6642% -99 - C3 -2ZSD 8.2 COAA_MYCTU
46 PsiBlast_CBE 95.6342%-101 - C3 -4BFV 6.9 COAA_MYCTU
55 PsiBlast_CBE 95.6242% -96 - C3 -3AF2 6.5 COAA_MYCTU
52 PsiBlast_CBE 95.5642% -99 - C3 -3AVP 3.4 COAA_MYCTU
54 PsiBlast_CBE 95.5542% -99 - C3 -3AF3 5.0 COAA_MYCTU
5 PsiBlast_PDB 95.4942% -99 - C3 -3AVO 2.8 COAA_MYCTU
12 PsiBlast_PDB 95.4542%-101 - C3 -2ZS8 6.9 COAA_MYCTU
7 PsiBlast_PDB 95.4442% -97 - C3 -2GES 8.1 COAA_MYCTU
41 PsiBlast_CBE 95.3842% -99 - C3 -4BFX 6.1 COAA_MYCTU
37 PsiBlast_CBE 95.2342% -95 - C3 -4BFZ 6.7 COAA_MYCTU
45 PsiBlast_CBE 95.0842% -99 - C3 -4BFV 7.1 COAA_MYCTU
39 PsiBlast_CBE 95.0542% -99 - C3 -4BFY 7.2 COAA_MYCTU
15 PsiBlast_PDB 94.9442% -97 - C3 -2ZSB 6.6 COAA_MYCTU
43 PsiBlast_CBE 94.9042% -99 - C3 -4BFW 8.4 COAA_MYCTU
75 HHSearch 94.8542%-102 * C3 *3TQC 6.8 COAA_COXBU
36 PsiBlast_CBE 94.8141%-102 - C3 -3TQC 7.8 COAA_COXBU
9 PsiBlast_PDB 94.5842%-100 - C3 -2GEU 8.4 COAA_MYCTU
4 PsiBlast_PDB 94.5441%-102 - C3 -3TQC 6.8 COAA_COXBU
42 PsiBlast_CBE 94.3542% -98 - C3 -4BFX 6.4 COAA_MYCTU
50 PsiBlast_CBE 94.2842%-101 - C3 -4BFT 7.3 COAA_MYCTU
49 PsiBlast_CBE 94.2142% -97 - C3 -4BFT 7.0 COAA_MYCTU
57 PsiBlast_CBE 94.0940%-100 - C3 -1SQ5 8.0 COAA_ECOLI
18 PsiBlast_PDB 94.0542%-100 - C3 -2ZSF 5.6 COAA_MYCTU
10 PsiBlast_PDB 93.5842% -97 - C3 -2GEV 8.8 COAA_MYCTU
21 PsiBlast_CBE 92.8241%-101 - C3 -4NE2 8.1 COAA_KLEP3
58 PsiBlast_CBE 92.6640%-101 - C3 -1SQ5 8.2 COAA_ECOLI