@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1046: (2015-12-05 )
MTEKEKMLAGQYYRPSAPELRKDREVALKNMQAFNNEDNSSKRNVILQKWFGATGKSIHMEQRFVCDYGCNIYVGENFYANFNQTFLDVCEIRIGDNCMFGPNCQLLTPLHPLDPIERNSGLEYGAPIQIGNNVWLGGGVTILPGVVLGDNVVVGAGSVVTKSFENNVVIAGNPAKIIKKLA

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_B_9(3V4E)
ATRF2_STAAC
[Raw transfer]




COA_B_8(3V4E)
ATRF2_STAAC
[Raw transfer]




GOL_A_6(3SRT)
?
[Raw transfer]




GOL_A_6(3SRT)
?
[Raw transfer]




GOL_C_17(3HJJ)
?
[Raw transfer]




GOL_C_17(3HJJ)
?
[Raw transfer]




ACY_A_4(3HJJ)
?
[Raw transfer]




ACY_A_5(3HJJ)
?
[Raw transfer]




EDO_C_20(2WLG)
OATWY_NEIME
[Raw transfer]




EDO_A_8(2WLG)
OATWY_NEIME
[Raw transfer]




EDO_C_21(2WLG)
OATWY_NEIME
[Raw transfer]




1 PsiBlast_PDB 91.2853%-134 * C2 *2IC7 - ? -
2 PsiBlast_PDB 90.1053%-134 - C2 -2P2O - ? -
119 HHSearch 89.1153%-130 - C2 -2P2O - ? -
121 HHSearch 87.5952%-133 - C2 -1OCX - MAA_ECOLI -
22 PsiBlast_CBE 87.4051%-128 - C2 -1OCX - MAA_ECOLI -
4 PsiBlast_PDB 87.4054%-128 - C2 -4ISX - ? -
5 PsiBlast_PDB 86.2751%-127 - C2 -1OCX - MAA_ECOLI -
122 HHSearch 86.1456%-127 - C2 -3SRT 3.4 ?
6 PsiBlast_PDB 86.0451%-125 - C2 -3HJJ 3.3 ?
3 PsiBlast_PDB 86.0254%-129 - C2 -3SRT 3.4 ?
21 PsiBlast_CBE 85.9451%-127 - C2 -1OCX - MAA_ECOLI -
7 PsiBlast_PDB 85.6351%-126 - C2 -3IGJ - ? -
125 HHSearch 84.5951%-123 - C2 -3HJJ 2.6 ?
139 Fugue 76.6639%-126 - C2 -1KRR - THGA_ECOLI -
124 HHSearch 76.6340%-125 - C2 -1KRR - THGA_ECOLI -
14 PsiBlast_PDB 76.3839%-130 - C2 -1KRU - THGA_ECOLI -
33 PsiBlast_CBE 76.0739%-129 - C2 -1KRU - THGA_ECOLI -
13 PsiBlast_PDB 76.0639%-125 - C2 -1KRR - THGA_ECOLI -
123 HHSearch 76.0333%-126 - C2 -3NZ2 - ? -
30 PsiBlast_CBE 75.8839%-129 - C2 -1KRV - THGA_ECOLI -
24 PsiBlast_CBE 71.2140%-112 - C2 -3V4E 2.9 ATRF2_STAAC
23 PsiBlast_CBE 70.6640%-112 - C2 -3V4E 3.1 ATRF2_STAAC
38 PsiBlast_CBE 53.8244%-180 - C2 -2WLG 3.6 OATWY_NEIME
130 HHSearch 53.0943%-178 - C2 -2WLG 2.1 OATWY_NEIME