@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1079: (2015-12-05 )
MNHQTQTLSLEHFVSLEELSNQEVMSLIKRSIEVKENPSNIGFDKDYYVSNLFFENSTRTHKSFEMAELKLGLKTIEFNADTSSVNKGETLYDTILTMSALGLDVCVIRHPDIDYYKELIASPNIHSAIVNGGDGSGQHPSQSLLDLVTIYEEFGYFKGLKIAIVGDLTHSRVAKSNMQVLKRLGAEIFFSGPKEWYSSQFDEYGQYLPIDQLVDQIDVLMLLRVQHERHDGKGVFSKESYHQQFGLTKERYKHLRDTAIIMHPAPVNRDVEIASDLVEADKARIVKQMSNGVYARIAILEAVLNSR

Atome Classification :

(70 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PAL_A_8(1TTH)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(4KGV)
?
[Raw transfer]




PAL_C_8(1XJW)
PYRB_ECOLI
[Raw transfer]




PAL_A_5(4KH1)
?
[Raw transfer]




PAL_C_8(4F04)
PYRB_ECOLI
[Raw transfer]




PAL_A_5(4KGV)
?
[Raw transfer]




PAL_D_4(1ML4)
PYRB_PYRAB
[Raw transfer]




PAL_A_5(4F04)
PYRB_ECOLI
[Raw transfer]




PAL_A_7(1D09)
PYRB_ECOLI
[Raw transfer]




6PR_A_8(2H3E)
PYRB_ECOLI
[Raw transfer]




PAL_B_7(1EKX)
PYRB_ECOLI
[Raw transfer]




PAL_C_11(4KH1)
?
[Raw transfer]




PAL_C_7(1TTH)
PYRB_ECOLI
[Raw transfer]




6PR_C_7(2H3E)
PYRB_ECOLI
[Raw transfer]




PAL_A_5(4KGX)
?
[Raw transfer]




PAL_A_7(1XJW)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(1EKX)
PYRB_ECOLI
[Raw transfer]




PAL_A_6(1EKX)
PYRB_ECOLI
[Raw transfer]




PAL_A_5(4KH0)
?
[Raw transfer]




PAL_C_10(4KH0)
?
[Raw transfer]




PAL_C_8(1D09)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(8ATC)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(4KGX)
?
[Raw transfer]




PAL_A_7(8ATC)
PYRB_ECOLI
[Raw transfer]




PAL_B_5(4BJH)
PYRB_AQUAE
[Raw transfer]




1IP_A_7(2IPO)
PYRB_ECOLI
[Raw transfer]




1IP_C_9(2IPO)
PYRB_ECOLI
[Raw transfer]




CP_A_4(3R7F)
PYRB_BACSU
[Raw transfer]




CP_A_4(3R7F)
PYRB_BACSU
[Raw transfer]




CP_C_16(3R7F)
PYRB_BACSU
[Raw transfer]




EOP_A_7(2FZC)
PYRB_ECOLI
[Raw transfer]




PCT_C_10(2HSE)
PYRB_ECOLI
[Raw transfer]




CP_B_11(3R7F)
PYRB_BACSU
[Raw transfer]




PCT_A_7(1TU0)
PYRB_ECOLI
[Raw transfer]




PCT_A_6(2HSE)
PYRB_ECOLI
[Raw transfer]




PCT_C_9(1TUG)
PYRB_ECOLI
[Raw transfer]




PCT_C_8(1TU0)
PYRB_ECOLI
[Raw transfer]




EOB_A_9(2FZG)
PYRB_ECOLI
[Raw transfer]




EOB_C_10(2FZG)
PYRB_ECOLI
[Raw transfer]




EOZ_C_8(2FZK)
PYRB_ECOLI
[Raw transfer]




EOP_C_8(2FZC)
PYRB_ECOLI
[Raw transfer]




PCT_A_7(2A0F)
PYRB_ECOLI
[Raw transfer]




EOZ_A_7(2FZK)
PYRB_ECOLI
[Raw transfer]




PG4_A_4(3LXM)
PYRB_YERPE
[Raw transfer]




ASP_A_7(2HSE)
PYRB_ECOLI
[Raw transfer]




FLC_B_5(3D6N)
PYRB_AQUAE
[Raw transfer]




ASP_C_12(2HSE)
PYRB_ECOLI
[Raw transfer]




AL0_G_9(2AIR)
PYRB_ECOLI
[Raw transfer]




AL0_A_10(2AIR)
PYRB_ECOLI
[Raw transfer]




NCD_A_9(1R0C)
PYRB_ECOLI
[Raw transfer]




PCT_A_10(1TUG)
PYRB_ECOLI
[Raw transfer]




NCD_G_10(1R0C)
PYRB_ECOLI
[Raw transfer]




MAL_A_5(8AT1)
PYRB_ECOLI
[Raw transfer]




MAL_C_6(8AT1)
PYRB_ECOLI
[Raw transfer]




MAL_C_6(7AT1)
PYRB_ECOLI
[Raw transfer]




CP_C_13(1ZA2)
PYRB_ECOLI
[Raw transfer]




CP_A_12(1ZA2)
PYRB_ECOLI
[Raw transfer]




3 PsiBlast_PDB 98.6650%-107 - C9 -3R7F 4.5 PYRB_BACSU
102 HHSearch 98.1750%-107 - C9 -3R7F 4.5 PYRB_BACSU
26 PsiBlast_CBE 97.7150%-105 - C9 -3R7F 4.3 PYRB_BACSU
27 PsiBlast_CBE 97.5350%-107 - C9 -3R7F 3.5 PYRB_BACSU
29 PsiBlast_CBE 97.0750%-107 - C9 -3R7D - PYRB_BACSU -
28 PsiBlast_CBE 97.0050%-107 - C9 -3R7D - PYRB_BACSU -
2 PsiBlast_PDB 96.1550%-104 - C9 -3R7D - PYRB_BACSU -
24 PsiBlast_CBE 95.4750%-101 - C9 -3R7L - PYRB_BACSU -
4 PsiBlast_PDB 95.1450%-102 - C9 -3R7L - PYRB_BACSU -
23 PsiBlast_CBE 95.1250%-104 - C9 -3R7L - PYRB_BACSU -
25 PsiBlast_CBE 94.9050%-101 - C9 -3R7L - PYRB_BACSU -
21 PsiBlast_CBE 94.6450% -99 - C9 -3R7L - PYRB_BACSU -
22 PsiBlast_CBE 94.1050%-100 - C9 -3R7L - PYRB_BACSU -
31 PsiBlast_CBE 85.4837% -85 - C9 -2BE7 - ? -
30 PsiBlast_CBE 85.1037% -90 - C9 -2BE7 - ? -
7 PsiBlast_PDB 84.6237% -87 - C9 -2BE7 - ? -
122 Fugue 83.7733%-104 - C9 -3CSU - PYRB_ECOLI -
79 PsiBlast_CBE 83.7333% -75 - C9 -3NPM - PYRB_ECOLI -
5 PsiBlast_PDB 83.6638%-102 - C9 -3D6N 2.6 PYRB_AQUAE
17 PsiBlast_PDB 83.3933% -87 - C9 -1RAG - PYRB_ECOLI -
6 PsiBlast_PDB 83.0938%-103 - C9 -4BJH 5.3 PYRB_AQUAE
56 PsiBlast_CBE 83.0133% -85 - C9 -2FZC 2.2 PYRB_ECOLI
77 PsiBlast_CBE 82.0333% -79 - C9 -1EKX 7.5 PYRB_ECOLI
54 PsiBlast_CBE 81.9933% -84 - C9 -2FZG 2.9 PYRB_ECOLI
88 PsiBlast_CBE 81.7933% -82 - C9 -1TU0 3.8 PYRB_ECOLI
76 PsiBlast_CBE 81.7633% -78 - C9 -1EKX 7.8 PYRB_ECOLI
41 PsiBlast_CBE 81.6833% -77 - C9 -4KGV 8.0 ?
55 PsiBlast_CBE 81.6033% -79 - C9 -2FZG 5.1 PYRB_ECOLI
42 PsiBlast_CBE 81.5533% -76 - C9 -4KGV 7.9 ?
93 PsiBlast_CBE 81.5233% -84 - C9 -2HSE 3.8 PYRB_ECOLI
8 PsiBlast_PDB 81.5233% -93 - C9 -3LXM 2.7 PYRB_YERPE
86 PsiBlast_CBE 81.4633% -81 - C9 -1TUG 4.2 PYRB_ECOLI
48 PsiBlast_CBE 81.4433% -77 - C9 -2IPO 6.4 PYRB_ECOLI
57 PsiBlast_CBE 81.4333% -80 - C9 -2FZC 3.5 PYRB_ECOLI
53 PsiBlast_CBE 81.3833% -84 - C9 -2FZK 3.9 PYRB_ECOLI
34 PsiBlast_CBE 81.3433% -74 - C9 -4KH1 8.1 ?
84 PsiBlast_CBE 81.3233% -76 - C9 -1D09 7.0 PYRB_ECOLI
60 PsiBlast_CBE 81.3233% -81 - C9 -1ZA2 2.9 PYRB_ECOLI
62 PsiBlast_CBE 81.2133% -85 - C9 -1R0C 3.6 PYRB_ECOLI
36 PsiBlast_CBE 81.2033% -76 - C9 -4KH0 8.1 ?
59 PsiBlast_CBE 81.1933% -87 - C9 -2AIR 3.1 PYRB_ECOLI
45 PsiBlast_CBE 81.1933% -76 - C9 -4F04 7.9 PYRB_ECOLI
94 PsiBlast_CBE 81.1433% -80 - C9 -2HSE 3.4 PYRB_ECOLI
35 PsiBlast_CBE 81.1133% -78 - C9 -4KH0 8.0 ?
96 PsiBlast_CBE 81.0633% -79 - C9 -8ATC 6.3 PYRB_ECOLI
49 PsiBlast_CBE 81.0533% -75 - C9 -2IPO 6.0 PYRB_ECOLI
40 PsiBlast_CBE 81.0533% -76 - C9 -4KGX 7.9 ?
58 PsiBlast_CBE 80.9233% -85 - C9 -2AIR 2.9 PYRB_ECOLI
89 PsiBlast_CBE 80.9033% -74 - C9 -1TTH 5.8 PYRB_ECOLI
63 PsiBlast_CBE 80.9033% -86 - C9 -1R0C 3.7 PYRB_ECOLI
44 PsiBlast_CBE 80.8933% -79 - C9 -4F04 7.8 PYRB_ECOLI
52 PsiBlast_CBE 80.8633% -82 - C9 -2FZK 2.3 PYRB_ECOLI
99 PsiBlast_CBE 80.8433% -78 - C9 -8AT1 2.6 PYRB_ECOLI
97 PsiBlast_CBE 80.8233% -78 - C9 -8ATC 6.1 PYRB_ECOLI
78 PsiBlast_CBE 80.8133% -77 - C9 -1EKX 7.6 PYRB_ECOLI
50 PsiBlast_CBE 80.7933% -75 - C9 -2H3E 7.3 PYRB_ECOLI
91 PsiBlast_CBE 80.7833% -79 - C9 -1XJW 6.8 PYRB_ECOLI
39 PsiBlast_CBE 80.7833% -74 - C9 -4KGX 7.9 ?
98 PsiBlast_CBE 80.6633% -79 - C9 -8AT1 2.8 PYRB_ECOLI
87 PsiBlast_CBE 80.6133% -86 - C9 -1TU0 3.6 PYRB_ECOLI
33 PsiBlast_CBE 80.6133% -75 - C9 -4KH1 7.9 ?
90 PsiBlast_CBE 80.5733% -75 - C9 -1TTH 5.7 PYRB_ECOLI
85 PsiBlast_CBE 80.5133% -85 - C9 -1TUG 3.4 PYRB_ECOLI
83 PsiBlast_CBE 80.4633% -80 - C9 -1D09 6.9 PYRB_ECOLI
61 PsiBlast_CBE 80.3233% -82 - C9 -1ZA2 2.8 PYRB_ECOLI
100 PsiBlast_CBE 80.2033% -81 - C9 -7AT1 2.6 PYRB_ECOLI
51 PsiBlast_CBE 79.7733% -74 - C9 -2H3E 7.3 PYRB_ECOLI
92 PsiBlast_CBE 79.5233% -77 - C9 -1XJW 5.9 PYRB_ECOLI
101 HHSearch 78.5032% -86 - C9 -1ML4 7.9 PYRB_PYRAB
95 PsiBlast_CBE 76.0333% -78 - C9 -2A0F 2.9 PYRB_ECOLI