@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1098: (2015-12-05 )
MIKRITLAVTGSISAYKAADLTSQLTKIGYDVHIIMTQAATEFITPLTLQVLSKNPIHLDVMDEHNPKIINHIELAKRTDLFIVAPASANTIAHLAYGFADNIVTSVALAMPDETPKLIAPAMNTKMYHNTITQRNIDILKKIGYQEIEPRISLLACGDTGQGALADISTILKCIQEVAN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_M_13(1QZU)
COAC_HUMAN
[Raw transfer]




FMN_M_13(1QZU)
COAC_HUMAN
[Raw transfer]




FMN_V_22(1QZU)
COAC_HUMAN
[Raw transfer]




FMN_D_4(1MVL)
HAL3A_ARATH
[Raw transfer]




FMN_P_16(1QZU)
COAC_HUMAN
[Raw transfer]




FMN_S_19(1QZU)
COAC_HUMAN
[Raw transfer]




FMN_G_7(1MVN)
HAL3A_ARATH
[Raw transfer]




FMN_B_2(1E20)
HAL3A_ARATH
[Raw transfer]




FMN_B_2(1E20)
HAL3A_ARATH
[Raw transfer]




27 HHSearch 89.6936%-140 - C2 -1QZU 5.7 COAC_HUMAN
22 PsiBlast_CBE 88.9836%-152 - C2 -1QZU 5.6 COAC_HUMAN
1 PsiBlast_PDB 88.1336%-150 - C2 -1QZU 5.7 COAC_HUMAN
21 PsiBlast_CBE 87.6336%-154 - C2 -1QZU 5.7 COAC_HUMAN
23 PsiBlast_CBE 87.0636%-152 - C2 -1QZU 5.7 COAC_HUMAN
28 HHSearch 83.8732%-122 - C2 -1MVL 6.3 HAL3A_ARATH
3 PsiBlast_PDB 81.8934%-117 - C2 -1MVL - HAL3A_ARATH -
48 Fugue 81.6033%-117 - C2 -1E20 6.7 HAL3A_ARATH
4 PsiBlast_PDB 79.5334%-112 - C2 -1MVN 5.7 HAL3A_ARATH
47 Fugue 79.3732%-108 - C2 -1E20 6.7 HAL3A_ARATH
2 PsiBlast_PDB 79.0334%-111 - C2 -1E20 - HAL3A_ARATH -
30 HHSearch 77.8727%-131 - C2 -1G63 - EPID_STAEP -
29 HHSearch 75.5626%-119 - C2 -3QJG - ? -
5 PsiBlast_PDB 68.6030%-129 - C2 -1G63 - EPID_STAEP -
7 PsiBlast_PDB 68.2827%-118 - C2 -3QJG - ? -
6 PsiBlast_PDB 66.0429%-129 - C2 -1G5Q - EPID_STAEP -
31 HHSearch 63.9316%-117 * C2 *3MCU - ? -
32 HHSearch 58.9516% -94 - C2 -2EJB - PAAD_AQUAE -
19 PsiBlast_PDB 58.7623%-139 - C2 -4RHE - ? -
33 HHSearch 57.4521% -84 - C2 -1SBZ - PAD1_ECO57 -