@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1154: (2015-12-05 )
MFNDIPVFDYEDIQLIPNKCIISSRSQADTSVKLGNYTFKLPVIPANMQTIIDEEVAETLACEGYFYIMHRFNEEERKPFIKRMHDKGLIASISVGVKDYEYDFVTSLKEDAPEFITIDIAHGHSNSVIEMIQHIKQELPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKVKTGFGTGGWQLAALRWCSKAARKPIIADGGIRTHGDIAKSIRFGASMVMIGSLFAGHLESPGKLVEVDGQQFKEYYGSASEYQKGEHKNVEGKKILLPVKGRLEDTLTEMQQDLQSSISYAGGKELDSLRHVDYVIVKNSIWNGDSI

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5GP_A_13(2A7R)
GMPR2_HUMAN
[Raw transfer]



XMP_A_3(2CU0)
IMDH_PYRHO
[Raw transfer]



5GP_A_2(2A1Y)
GUAC_BACAN
[Raw transfer]



5GP_C_10(2BWG)
GMPR1_HUMAN
[Raw transfer]



5GP_D_12(2BWG)
GMPR1_HUMAN
[Raw transfer]



5GP_B_8(2BWG)
GMPR1_HUMAN
[Raw transfer]



XMP_B_4(3TSD)
?
[Raw transfer]



IMP_A_2(1ZFJ)
IMDH_STRPY
[Raw transfer]



XMP_A_3(3TSD)
?
[Raw transfer]



IMP_A_3(3USB)
?
[Raw transfer]
1 PsiBlast_PDB 97.3675%-100 - C2 -2A1Y 5.9 GUAC_BACAN
49 PsiBlast_CBE 77.4734% -89 - C2 -2A7R - GMPR2_HUMAN -
8 PsiBlast_PDB 76.9734% -79 - C2 -2A7R 6.4 GMPR2_HUMAN
56 PsiBlast_CBE 75.5234% -85 - C2 -2C6Q - GMPR2_HUMAN -
62 PsiBlast_CBE 75.3134% -85 - C2 -2BZN - GMPR2_HUMAN -
59 PsiBlast_CBE 74.7534% -85 - C2 -2BZN - GMPR2_HUMAN -
57 PsiBlast_CBE 74.6834% -87 - C2 -2BZN - GMPR2_HUMAN -
50 PsiBlast_CBE 74.4434% -83 - C2 -2C6Q - GMPR2_HUMAN -
58 PsiBlast_CBE 74.1734% -88 - C2 -2BZN - GMPR2_HUMAN -
55 PsiBlast_CBE 73.9534% -84 - C2 -2C6Q - GMPR2_HUMAN -
9 PsiBlast_PDB 73.6434% -85 - C2 -2BZN - GMPR2_HUMAN -
61 PsiBlast_CBE 73.5434% -87 - C2 -2BZN - GMPR2_HUMAN -
51 PsiBlast_CBE 73.3634% -84 - C2 -2C6Q - GMPR2_HUMAN -
52 PsiBlast_CBE 73.1634% -83 - C2 -2C6Q - GMPR2_HUMAN -
103 PsiBlast_CBE 73.0131% -85 - C2 -4IX2 - ? -
100 PsiBlast_CBE 72.7731% -85 - C2 -4IX2 - ? -
54 PsiBlast_CBE 72.6134% -82 - C2 -2C6Q - GMPR2_HUMAN -
60 PsiBlast_CBE 72.3734% -82 - C2 -2BZN - GMPR2_HUMAN -
97 PsiBlast_CBE 72.1131% -90 - C2 -4QQ3 - ? -
10 PsiBlast_PDB 72.0734% -82 - C2 -2C6Q - GMPR2_HUMAN -
121 HHSearch 70.2433% -95 - C2 -3USB 4.3 ?
66 PsiBlast_CBE 69.6532% -75 - C2 -2BWG 6.7 GMPR1_HUMAN
65 PsiBlast_CBE 69.4932% -76 - C2 -2BWG 6.8 GMPR1_HUMAN
64 PsiBlast_CBE 69.1832% -77 - C2 -2BWG 6.6 GMPR1_HUMAN
126 HHSearch 61.4231% -78 - C2 -2CU0 5.9 IMDH_PYRHO
20 PsiBlast_PDB 59.8239% -88 - C2 -3TSD 4.9 ?
93 PsiBlast_CBE 58.8639% -85 - C2 -3TSD 5.3 ?
124 HHSearch 39.6536% -57 - C2 -1ZFJ 4.9 IMDH_STRPY