@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1165: (2015-12-05 )
MIYLDNAATTALTPSVIEKMTNVMTSNYGNPSSIHTFGRQANQLLRECRQIIAEYLNVNSREIIFTSGGTESNNTAIKGYALANQLKGKHIITSEIEHHSVLHTMTYLSERFGFDITYLKPNHGQITAKDVQEALRDDTIMVSLMFANNETGDFLPIQEIGQLLRNHQAVFHVDAVQVFSKMELDPHSLGIDFLAASAHKFHGPKGVGILYCAPHHFDSLLHGGDQEEKRRASTENIIGIAGMSQALTDATTNTLKNWTHISQLRTTFLDAISDLDFYLNNGQDCLPHVLNIGFPRQNNGLLLTQLDLAGFAVSTGSACTAGTVEPSHVLTSLYGANSPRLNESIRISFSELNTQEEILELAKTLRKIIGD

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMP_A_5(4HVK)
ISCS2_ARCFU
[Raw transfer]



PLP_D_4(1ECX)
?
[Raw transfer]



PLP_A_3(3VAX)
?
[Raw transfer]



PLP_A_3(3VAX)
?
[Raw transfer]



PLP_C_3(1ECX)
?
[Raw transfer]



PLP_C_3(1ECX)
?
[Raw transfer]



PLP_B_4(3VAX)
?
[Raw transfer]



PLP_B_6(3LVJ)
ISCS_ECO57
[Raw transfer]



PLP_B_8(4EB7)
ISCS2_ARCFU
[Raw transfer]



CYS_F_6(1ECX)
?
[Raw transfer]



PLP_A_3(3A9X)
SCLY_RAT
[Raw transfer]



PLP_A_6(1EG5)
?
[Raw transfer]



PLP_A_6(1EG5)
?
[Raw transfer]



PLP_A_4(4EB7)
ISCS2_ARCFU
[Raw transfer]



PLP_A_3(3A9Z)
SCLY_RAT
[Raw transfer]



PLP_B_9(4EB5)
ISCS2_ARCFU
[Raw transfer]



PLP_A_3(3A9Z)
SCLY_RAT
[Raw transfer]



LPG_C_3(1I29)
SUFS_ECOLI
[Raw transfer]



PLP_A_3(3LVK)
ISCS_ECO57
[Raw transfer]



ACY_E_5(1C0N)
SUFS_ECOLI
[Raw transfer]



CYS_E_5(1ECX)
?
[Raw transfer]
1 PsiBlast_PDB 94.2841% -85 - C1 -3LVJ - ISCS_ECO57 -
2 PsiBlast_PDB 93.4741% -85 - C1 -3LVK 3.5 ISCS_ECO57
21 PsiBlast_CBE 91.5241% -87 - C1 -3LVJ 3.9 ISCS_ECO57
32 HHSearch 88.6235% -91 - C1 -1EG5 4.0 ?
55 Fugue 88.2135% -91 * C1 *1ECX 3.7 ?
3 PsiBlast_PDB 87.7335% -91 - C1 -1ECX 3.9 ?
22 PsiBlast_CBE 87.5035% -91 - C1 -1ECX 3.9 ?
57 Fugue 86.7635% -86 - C1 -4ISY - ISCSL_MYCTU -
8 PsiBlast_PDB 85.6234% -89 - C1 -1EG5 4.0 ?
18 PsiBlast_PDB 82.4225% -97 - C1 -1JF9 - SUFS_ECOLI -
11 PsiBlast_PDB 82.3032% -78 - C1 -3GZD - SCLY_HUMAN -
6 PsiBlast_PDB 82.2032% -88 - C1 -4HVK 3.5 ISCS2_ARCFU
5 PsiBlast_PDB 81.9632% -86 - C1 -4EB7 2.6 ISCS2_ARCFU
25 PsiBlast_CBE 81.7336% -78 - C1 -4ISY - ISCSL_MYCTU -
30 PsiBlast_CBE 81.1032% -77 - C1 -3GZD - SCLY_HUMAN -
19 PsiBlast_PDB 81.0825% -96 - C1 -1I29 3.5 SUFS_ECOLI
23 PsiBlast_CBE 80.8032% -87 - C1 -4EB7 3.0 ISCS2_ARCFU
4 PsiBlast_PDB 80.5132% -85 - C1 -4EB5 - ISCS2_ARCFU -
10 PsiBlast_PDB 80.2932% -77 - C1 -3GZC - SCLY_HUMAN -
7 PsiBlast_PDB 80.1836% -79 - C1 -4ISY - ISCSL_MYCTU -
24 PsiBlast_CBE 80.0132% -89 - C1 -4EB5 3.2 ISCS2_ARCFU
9 PsiBlast_PDB 79.9435% -78 - C1 -3VAX 3.8 ?
28 PsiBlast_CBE 79.6735% -78 - C1 -3VAX 3.9 ?
39 HHSearch 79.4230% -78 - C1 -3A9Z 4.0 SCLY_RAT
12 PsiBlast_PDB 78.8730% -85 - C1 -3A9X 4.4 SCLY_RAT
34 HHSearch 77.1736% -74 - C1 -3VAX 3.8 ?
13 PsiBlast_PDB 75.6330% -78 - C1 -3A9Z 4.0 SCLY_RAT