@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1181: (2015-12-06 )
MDKIYLNKCRFYGYHGAFSEEQTLGQVFQVDAVLSLDLAKASQTDDLIDTVHYGEVFDCIKNHVENEQYQLIEKLAGVIVEDIFLQFHPVQAITLKITKDNPPINGHYESVGIELERKRV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NPR_I_9(1U68)
FOLB_STAAU
[Raw transfer]




204_I_9(1RRY)
FOLB_STAAU
[Raw transfer]




NEU_B_6(2NM2)
FOLB_STAAU
[Raw transfer]




45P_A_2(1RS4)
FOLB_STAAU
[Raw transfer]




NEU_C_7(2NM2)
FOLB_STAAU
[Raw transfer]




NEU_A_5(2NM2)
FOLB_STAAU
[Raw transfer]




MPU_A_3(2NM3)
FOLB_STAAU
[Raw transfer]




9MG_I_9(1RRW)
FOLB_STAAU
[Raw transfer]




PH2_I_9(2DHN)
FOLB_STAAU
[Raw transfer]




PSB_I_9(1RSD)
FOLB_STAAU
[Raw transfer]




NEU_D_8(2NM2)
FOLB_STAAU
[Raw transfer]




209_I_9(1RS2)
FOLB_STAAU
[Raw transfer]




977_A_2(1RSI)
FOLB_STAAU
[Raw transfer]




8 PsiBlast_PDB 92.1450%-137 - C3 -1U68 3.5 FOLB_STAAU
5 PsiBlast_PDB 91.8150%-136 - C3 -1RS4 3.7 FOLB_STAAU
7 PsiBlast_PDB 91.6250%-136 - C3 -1RSI 4.0 FOLB_STAAU
48 HHSearch 91.5849%-133 * C3 *1DHN - FOLB_STAAU -
2 PsiBlast_PDB 91.4950%-136 - C3 -1RRW 3.9 FOLB_STAAU
4 PsiBlast_PDB 90.8750%-139 - C3 -1RS2 3.2 FOLB_STAAU
3 PsiBlast_PDB 90.8350%-132 - C3 -1RRY 3.9 FOLB_STAAU
10 PsiBlast_PDB 90.6850%-135 - C3 -2DHN 3.7 FOLB_STAAU
1 PsiBlast_PDB 90.6650%-130 - C3 -1RRI - FOLB_STAAU -
9 PsiBlast_PDB 90.5850%-138 - C3 -1DHN - FOLB_STAAU -
6 PsiBlast_PDB 90.2450%-137 - C3 -1RSD 4.1 FOLB_STAAU
23 PsiBlast_CBE 89.8650%-131 - C3 -2NM2 3.9 FOLB_STAAU
22 PsiBlast_CBE 89.5050%-138 - C3 -2NM2 2.9 FOLB_STAAU
12 PsiBlast_PDB 88.1950%-130 - C3 -2NM3 3.3 FOLB_STAAU
11 PsiBlast_PDB 87.4050%-128 - C3 -2NM2 2.9 FOLB_STAAU
21 PsiBlast_CBE 86.0550%-124 - C3 -2NM2 3.2 FOLB_STAAU
24 PsiBlast_CBE 85.6936%-127 - C3 -1SQL - FOLB1_ARATH -
32 PsiBlast_CBE 85.0336%-128 - C3 -1SQL - FOLB1_ARATH -
57 HHSearch 84.4932%-134 - C3 -2CG8 - SULD_STRR6 -
14 PsiBlast_PDB 84.0331%-134 - C3 -2CG8 - SULD_STRR6 -