@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1227: (2015-12-06 )
MTVNLDWDNLGFAYRKLPFRYISHFKDGKWDDGKLTDDATLHISESSPALHYGQQAFEGLKAYRTKDGSIQLFRPDQNAERLQRTADRLLMPHVPTDKFIAAVKSVVRANEEFVPPYGTGATLYIRPLLIGVGDIIGVKPAEEYIFTVFAMPVGSYFKGGLTPTNFIVSKEYDRAAPNGTGAAKVGGNYAASLLPGKYAHEKQFSDVIYLDPATHTKIEEVGAANFFGITKDNQFITPLSPSILPSITKYSLLYLAKERFGMEAIEGDVFVDELDKFTEAGACGTAAVISPIGGIQNGDDFHVFYSETEVGPATRKLYDELVGIQFGDVEAPEGWIYKVD

Atome Classification :

(51 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGU_K_11(1IYE)
ILVE_ECOLI
[Raw transfer]




PGU_G_7(1IYE)
ILVE_ECOLI
[Raw transfer]




PGU_G_7(1IYE)
ILVE_ECOLI
[Raw transfer]




PGU_I_9(1IYE)
ILVE_ECOLI
[Raw transfer]




ILP_A_3(1KT8)
BCAT2_HUMAN
[Raw transfer]




GUA_M_13(1IYD)
ILVE_ECOLI
[Raw transfer]




GLU_B_6(3UZO)
?
[Raw transfer]




GOL_B_6(3JZ6)
ILVE_MYCS2
[Raw transfer]




GOL_A_5(3DTF)
ILVE_MYCS2
[Raw transfer]




GOL_B_6(3DTF)
ILVE_MYCS2
[Raw transfer]




PLP_A_3(3UZO)
?
[Raw transfer]




PLP_A_3(3UZO)
?
[Raw transfer]




PLP_B_5(3UZO)
?
[Raw transfer]




PLP_B_4(3UYY)
?
[Raw transfer]




PMP_A_2(3HT5)
ILVE_MYCTU
[Raw transfer]




GLU_A_4(3UZO)
?
[Raw transfer]




PLP_A_3(3UYY)
?
[Raw transfer]




2ML_L_12(1I1L)
ILVE_ECOLI
[Raw transfer]




PMP_D_4(1KTA)
BCAT2_HUMAN
[Raw transfer]




GBN_B_7(2COJ)
BCAT1_HUMAN
[Raw transfer]




GBN_A_6(2A1H)
BCAT2_HUMAN
[Raw transfer]




2ML_J_10(1I1L)
ILVE_ECOLI
[Raw transfer]




PLP_A_3(1EKV)
BCAT2_HUMAN
[Raw transfer]




PLP_K_11(1I1L)
ILVE_ECOLI
[Raw transfer]




PLP_I_9(1I1L)
ILVE_ECOLI
[Raw transfer]




PLP_G_7(1I1L)
ILVE_ECOLI
[Raw transfer]




4MV_I_9(1I1M)
ILVE_ECOLI
[Raw transfer]




PLP_C_13(1I1M)
ILVE_ECOLI
[Raw transfer]




PLP_A_3(3DTG)
ILVE_MYCS2
[Raw transfer]




PLP_A_4(2COJ)
BCAT1_HUMAN
[Raw transfer]




PLP_A_3(1EKP)
BCAT2_HUMAN
[Raw transfer]




PLP_B_5(3JZ6)
ILVE_MYCS2
[Raw transfer]




PLP_B_5(3DTG)
ILVE_MYCS2
[Raw transfer]




PLP_A_7(1A3G)
ILVE_ECOLI
[Raw transfer]




PLP_C_11(1I1K)
ILVE_ECOLI
[Raw transfer]




4MV_B_7(2COG)
BCAT1_HUMAN
[Raw transfer]




PLP_A_3(3DTG)
ILVE_MYCS2
[Raw transfer]




PLP_A_3(3JZ6)
ILVE_MYCS2
[Raw transfer]




PLP_A_7(1A3G)
ILVE_ECOLI
[Raw transfer]




PLP_A_7(1IYD)
ILVE_ECOLI
[Raw transfer]




PLP_A_7(1I1K)
ILVE_ECOLI
[Raw transfer]




PLP_A_7(1I1M)
ILVE_ECOLI
[Raw transfer]




PLP_A_3(1EKF)
BCAT2_HUMAN
[Raw transfer]




PLP_B_9(1A3G)
ILVE_ECOLI
[Raw transfer]




PLP_B_9(1IYD)
ILVE_ECOLI
[Raw transfer]




PLP_B_9(1I1K)
ILVE_ECOLI
[Raw transfer]




PLP_A_3(2HDK)
BCAT2_HUMAN
[Raw transfer]




PLP_B_5(2COG)
BCAT1_HUMAN
[Raw transfer]




PLP_A_4(2HGW)
BCAT2_HUMAN
[Raw transfer]




PLP_C_11(1IYD)
ILVE_ECOLI
[Raw transfer]




PLP_A_3(5BWT)
BCAT2_HUMAN
[Raw transfer]




PLP_B_5(2COJ)
BCAT1_HUMAN
[Raw transfer]




PLP_B_10(1I1M)
ILVE_ECOLI
[Raw transfer]




PLP_A_3(2A1H)
BCAT2_HUMAN
[Raw transfer]




PLP_C_11(1A3G)
ILVE_ECOLI
[Raw transfer]




4VT_A_4(5BWR)
BCAT2_HUMAN
[Raw transfer]




4VS_A_4(5BWT)
BCAT2_HUMAN
[Raw transfer]




ACY_F_6(2HDK)
BCAT2_HUMAN
[Raw transfer]




KIV_C_3(1KTA)
BCAT2_HUMAN
[Raw transfer]




ACY_K_11(2HGW)
BCAT2_HUMAN
[Raw transfer]




1 PsiBlast_PDB 97.8086% -93 - C7 -4DQN - ? -
25 PsiBlast_CBE 95.2270% -97 - C7 -3UYY 5.3 ?
4 PsiBlast_PDB 93.4470% -94 - C7 -3UZO 5.6 ?
3 PsiBlast_PDB 93.3370% -88 - C7 -3UZB - ? -
2 PsiBlast_PDB 93.1770% -94 - C7 -3UYY 5.5 ?
21 PsiBlast_CBE 92.9170% -95 - C7 -3UZO 5.0 ?
23 PsiBlast_CBE 91.5770% -89 - C7 -3UZB - ? -
24 PsiBlast_CBE 91.2170% -90 - C7 -3UZB - ? -
68 HHSearch 90.4368% -87 - C7 -3UZO 5.5 ?
22 PsiBlast_CBE 90.1270% -92 - C7 -3UZB - ? -
66 HHSearch 79.0841% -79 - C7 -3DTG 3.9 ILVE_MYCS2
28 PsiBlast_CBE 78.2541% -76 - C7 -3DTF 1.9 ILVE_MYCS2
8 PsiBlast_PDB 77.6440% -77 - C7 -3HT5 4.9 ILVE_MYCTU
26 PsiBlast_CBE 77.6341% -74 - C7 -3JZ6 4.5 ILVE_MYCS2
27 PsiBlast_CBE 77.0441% -75 - C7 -3DTG 4.2 ILVE_MYCS2
5 PsiBlast_PDB 76.4241% -72 - C7 -3JZ6 4.1 ILVE_MYCS2
6 PsiBlast_PDB 76.3741% -72 - C7 -3DTF 2.1 ILVE_MYCS2
7 PsiBlast_PDB 76.3041% -73 - C7 -3DTG 3.9 ILVE_MYCS2
15 PsiBlast_PDB 74.8730% -81 - C7 -1EKV 4.6 BCAT2_HUMAN
14 PsiBlast_PDB 74.8030% -84 - C7 -1EKP 3.2 BCAT2_HUMAN
18 PsiBlast_PDB 74.6730% -83 - C7 -2A1H 4.4 BCAT2_HUMAN
13 PsiBlast_PDB 74.5630% -84 - C7 -1EKF 4.2 BCAT2_HUMAN
11 PsiBlast_PDB 73.9630% -84 - C7 -2HDK 4.5 BCAT2_HUMAN
16 PsiBlast_PDB 73.7630% -82 - C7 -1KT8 4.8 BCAT2_HUMAN
17 PsiBlast_PDB 73.7030% -81 - C7 -1KTA 4.9 BCAT2_HUMAN
20 PsiBlast_PDB 72.9230% -85 - C7 -5BWT 3.7 BCAT2_HUMAN
30 PsiBlast_CBE 72.8833% -78 - C7 -2COG 4.6 BCAT1_HUMAN
29 PsiBlast_CBE 71.8333% -78 - C7 -2COJ 4.5 BCAT1_HUMAN
19 PsiBlast_PDB 71.8030% -81 - C7 -5BWR 3.5 BCAT2_HUMAN
12 PsiBlast_PDB 71.7830% -83 - C7 -2HGW 3.8 BCAT2_HUMAN
9 PsiBlast_PDB 71.3533% -77 - C7 -2COJ 5.0 BCAT1_HUMAN
41 PsiBlast_CBE 69.3432% -67 - C7 -1IYD 4.1 ILVE_ECOLI
45 PsiBlast_CBE 69.0532% -69 - C7 -1I1M 3.6 ILVE_ECOLI
48 PsiBlast_CBE 68.8732% -72 - C7 -1I1L 5.1 ILVE_ECOLI
39 PsiBlast_CBE 68.3132% -68 - C7 -1IYE 7.9 ILVE_ECOLI
37 PsiBlast_CBE 68.3032% -66 * C7 *1IYE 7.8 ILVE_ECOLI
40 PsiBlast_CBE 68.1532% -69 - C7 -1IYD 3.5 ILVE_ECOLI
42 PsiBlast_CBE 68.1032% -66 - C7 -1IYD 4.2 ILVE_ECOLI
38 PsiBlast_CBE 68.0832% -66 - C7 -1IYE 7.7 ILVE_ECOLI
46 PsiBlast_CBE 68.0232% -68 - C7 -1I1L 4.8 ILVE_ECOLI
47 PsiBlast_CBE 67.8332% -69 - C7 -1I1L 4.9 ILVE_ECOLI
44 PsiBlast_CBE 67.5932% -70 - C7 -1I1M 3.7 ILVE_ECOLI
43 PsiBlast_CBE 67.3532% -68 - C7 -1I1M 3.9 ILVE_ECOLI
51 PsiBlast_CBE 66.1932% -68 - C7 -1I1K 4.0 ILVE_ECOLI
70 HHSearch 66.1632% -68 - C7 -1IYE 7.8 ILVE_ECOLI
49 PsiBlast_CBE 65.7432% -67 - C7 -1I1K 3.5 ILVE_ECOLI
50 PsiBlast_CBE 65.6932% -68 - C7 -1I1K 3.8 ILVE_ECOLI
36 PsiBlast_CBE 64.3032% -69 - C7 -1A3G 3.5 ILVE_ECOLI
35 PsiBlast_CBE 64.1332% -67 - C7 -1A3G 3.6 ILVE_ECOLI
81 Fugue 64.0830% -62 - C7 -1A3G 3.5 ILVE_ECOLI
34 PsiBlast_CBE 63.4932% -65 - C7 -1A3G 4.1 ILVE_ECOLI