@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1288: (2015-12-06 )
MKRKDLFGDKQTQYTIRKLSVGVASVATGVCIFLHSPQVFAEEVSVSPATTAIAKSNINQVDNRQSTNLKDDINSNSETVVTPSDMPDTKQLVSDETDTQKGVTEPDKATSLLEENKGPVSDKNTLDLKVAPSTLQNTPDKTSQAIGAPSPTLKVANQAPQIENGYFRLHLKELPQGHPVESTGLWIWGDVDQPSSNWPNGAIPMTNAKKDDYGYYVDFKLSEKQRKQISFLINNKAGTNLSGDHHIPLLRPEMNQVWIDEKYGIHTYQPLKEGYVRINYLSSSGNYDHLSAWLFKDVATPSTTWPDGSNFVNQGLYGRYIDVPLKTNAKEIGFLILDESKTGDAVKVQPNDYVFRDLANHNQIFVKDKDPKVYNNPYYIDQVQLKDAQQTDLTSIQASFTTLDGVDKTEILKELKVTDKNQNAIQISDITLDTSKSLLIIKGDFNPKQGHFNISYNGNNVTTRQSWEFKDQLYAYSGNLGAVLNQDGSKVEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKNNKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDKVKILDPYAKSLAEWDSNTVNDDIKTAKAAFVNPSQLGPQNLSFAKIANFKGRQDAVIYEAHVRDFTSDQSLDGKLKNQFVTFAAFSEKLDYLQKLGVTHIQLLPVLSYFYVNEMDKSRSTAYTSSDNNYNWGYDPQSYFALSGMYSEKPKDPSARIAELKQLIHDIHKRGMGVILDVVYNHTAKTYLFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAMSRRVLVDSIKYLTSEFKVDGFRFDMMGDHDAAAIELAYKEAKAINPNMIMIGEGWRTFQGDQGKPVKPADQDWMKSTDTVGVFSDDIRNSLKSGFPNEGTPAFITGGPQSLQGIFKNIKAQPGNFEADSPGDVVQYIAAHDNLTLHDVIAKSINKDPKVAEEEIHRRLRLGNVMILTSQGTAFIHSGQEYGRTKRLLNPDYMTKVSDDKLPNKATLIEAVKEYPYFIHDSYDSSDAINHFDWAAATDNNKHPISTKTQAYTAGLITLRRSTDAFRKLSKAEIDREVSLITEVGQGDIKEKDLVIAYQTIDSKGDIYAVFVNADSKARNVLLGEKYKHLLKGQVIVDADQAGIKPISTPRGVHFEKDSLLIDPLTAIVIKVGKVAPSPKEELQADYPKTQSFKGSKTVEKVNRIANKTSITPVVSNKTDSYLTNEANLPKTGDKSSKILSVVGISILASLLALLGLSLKRNRHLK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GLC_A_3(2YA2)
?
[Raw transfer]



BTB_A_12(3M07)
?
[Raw transfer]



GOL_A_6(2YA0)
?
[Raw transfer]



GOL_A_6(2YA0)
?
[Raw transfer]



GOL_A_3(2YA0)
?
[Raw transfer]



SUGAR_A_2(3FAX)
?
[Raw transfer]
-
25 HHSearch 98.1499% -72 - C1 -3FAW - ? -
1 PsiBlast_PDB 98.1499% -72 - C1 -3FAW - ? -
46 Fugue 98.0499% -72 - C1 -3FAW - ? -
2 PsiBlast_PDB 96.7399% -72 - C1 -3FAX 4.7 ?
4 PsiBlast_PDB 81.9561% -65 - C1 -2YA2 3.2 ?
3 PsiBlast_PDB 81.8661% -63 - C1 -2YA0 2.4 ?
29 HHSearch 81.1962% -62 - C1 -2YA0 2.4 ?
27 HHSearch 68.9426% -53 - C1 -2FHF - PULA_ENTAE -
30 HHSearch 65.0430% -58 - C1 -3WDH - ? -
48 Fugue 63.4527% -48 - C1 -2E8Y - PULA_BACSU -
28 HHSearch 62.8630% -52 * C1 *2E8Y - PULA_BACSU -
8 PsiBlast_PDB 61.5429% -52 - C1 -2E8Z - PULA_BACSU -
9 PsiBlast_PDB 61.5129% -54 - C1 -2E9B - PULA_BACSU -
7 PsiBlast_PDB 60.9929% -51 - C1 -2E8Y - PULA_BACSU -
54 Fugue 59.7526% -29 - C1 -2YOC - PULA_KLEPN -
10 PsiBlast_PDB 59.2029% -44 - C1 -3WDH - ? -
31 HHSearch 58.7922% -40 - C1 -1BF2 - ISOA_PSEAY -
32 HHSearch 56.3723% -46 - C1 -2VR5 - ? -
50 Fugue 55.6421% -32 - C1 -2FHF - PULA_ENTAE -
38 HHSearch 55.6321% -54 - C1 -2BHU - TREZ_DEIRA -