@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1393: (2015-12-07 )
MTNRKDDHIKYALKYQSPYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYINAMTGGSEKGKAVNHKLAQVAQATGIVMATGSYSAALKNDEDDSYPTTDLYPDLKLATNIGLDKPLPAAESTVKAMNPIFLQVHVNVMQELLMPEGEREFHMWRSHLKEYVDNIQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIENQRGRDRSYLNTWGQTTAQSLINAQSMMDKMDILASGGIRHPLDMVKCLVLGAKAVGLSRTVLELVERYPVDDVIAILNSWKEDLRMIMCALNCKKITDLRQVNYILYGQLKEANAK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_I_9(1P0N)
IDI2_BACSU
[Raw transfer]




FNR_A_5(4N02)
IDI2_STRPS
[Raw transfer]




FMN_M_13(1P0N)
IDI2_BACSU
[Raw transfer]




21 PsiBlast_CBE 94.5469%-141 - C3 -3SR7 - IDI2_STRMU -
1 PsiBlast_PDB 91.2865%-107 - C3 -4N02 10.6 IDI2_STRPS
55 HHSearch 73.0434%-106 - C3 -1P0K - IDI2_BACSU -
22 PsiBlast_CBE 70.4035%-109 - C3 -1P0N 6.3 IDI2_BACSU
2 PsiBlast_PDB 70.2735%-104 - C3 -1P0K - IDI2_BACSU -
41 Fugue 70.0730%-103 * C3 *1P0K - IDI2_BACSU -
3 PsiBlast_PDB 69.8535%-105 - C3 -1P0N 6.0 IDI2_BACSU
23 PsiBlast_CBE 69.1535%-104 - C3 -1P0K - IDI2_BACSU -
17 PsiBlast_PDB 69.0328%-111 - C3 -1VCG - IDI2_THET2 -
15 PsiBlast_PDB 67.9229%-104 - C3 -3DH7 - ? -
16 PsiBlast_PDB 66.6628%-106 - C3 -1VCF - IDI2_THET2 -
11 PsiBlast_PDB 66.0126% -91 - C3 -3B04 - IDI2_SULSH -
57 HHSearch 65.6427%-100 - C3 -1VCF - IDI2_THET2 -
5 PsiBlast_PDB 65.6326% -91 - C3 -2ZRV - IDI2_SULSH -
4 PsiBlast_PDB 65.2826% -97 - C3 -2ZRU - IDI2_SULSH -
14 PsiBlast_PDB 65.0226% -90 - C3 -3VKJ - IDI2_SULSH -
58 HHSearch 64.9928% -84 - C3 -3VKJ - IDI2_SULSH -
7 PsiBlast_PDB 64.7526% -88 - C3 -2ZRX - IDI2_SULSH -
13 PsiBlast_PDB 64.3326% -89 - C3 -3B06 - IDI2_SULSH -
9 PsiBlast_PDB 64.2826% -88 - C3 -2ZRZ - IDI2_SULSH -